Oncorhynchus tshawytscha (Chinook salmon): 112235563
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Entry
112235563 CDS
T05605
Name
(RefSeq) RNA binding protein fox-1 homolog 3 isoform X1
KO
K14946
RNA binding protein fox-1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
otw03041
]
112235563
Spliceosome [BR:
otw03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
112235563
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
112235563
NCBI-ProteinID:
XP_042183628
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All DBs
Position
LG09:complement(83189345..83499821)
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AA seq
381 aa
AA seq
DB search
METPSWAGNTLCKSGSIAVFGNVVYSGLLNEHLWHLGVPLFTRLGNQEATNPPEAMAQPY
TPAQYPPPPQNGIPAEFAAPHPLPTQDYTGQNRVPEHAMTLYTPTQTHSEPPGTDNNTPA
ITANTTVPTDDVTQSEVSLQLQLQLSDSSEKQQPKRLHVSNIPFRFRDPDLRQMFGQFGK
ILDVEIIFNERGSKGFGFVTFETSTDADRAREKLNGTIVEGRKIEVNNATARVMTNKKVA
NPYTNGWKLNPVVGAVYGPELYAVTGFPYPATGATVAYRGAHLRGRGRAVYNTFRTAPPP
PPIPAYGAVVYQDGFYGAEIYGGYAAYRYAQPTTAAAYSDSYGRVYATADPYHHTIGPAA
TYSVGTMASLYRGGYSRFTPY
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggagacccccagctgggcaggaaacacattgtgtaaatcaggaagcattgctgtcttc
gggaacgtggtgtacagcgggctgctcaacgagcacctctggcatttaggagttcccctc
ttcacgagactgggtaaccaagaggccaccaaccccccagaagccatggcccagccgtac
acgcctgcccagtacccgcctcccccacagaatggcatcccggccgagtttgcggcaccc
caccccctccccacgcaggactacaccgggcagaacagggtgcccgagcatgccatgacc
ctctacacccccacacagacgcacagtgagccgccgggcaccgacaacaacacgcccgcc
atcaccgccaacacaactgtaccgacagatgacgtgacgcaatcagaggtctccctgcag
ctccagctgcagctctcggactcctcggagaagcagcagcccaagaggttacatgtctcc
aacatccccttccgcttccgtgaccccgacctgcggcaaatgtttgggcaatttggaaag
attctagatgtggagattatctttaatgagcgaggatccaagggctttgggtttgtaact
tttgaaacgagcacagatgccgaccgtgcgcgggagaaactaaacggtacaatcgtagag
ggacgcaaaatagaggtgaataatgcaacagcaagagtgatgacaaacaaaaaagttgcc
aacccgtacacaaatggctggaagctgaaccctgtggtgggtgctgtctatggtcctgaa
ttgtatgctgtaacaggtttcccttacccggccacaggggctacggtggcctataggggt
gcccacttgcgaggccgggggcgggctgtgtacaacaccttccgcacagcacctccacca
ccacctattccagcttatggagcagtggtgtaccaggatggcttctacggagcagaaatc
tatgggggctacgctgcgtaccgatacgcccagcccaccaccgctgctgcctacagtgac
agctatggcagagtctatgcaacagcagacccctaccaccacacaatcggccctgccgct
acatacagtgtggggaccatggctagcctatacagaggagggtacagtcgcttcactccc
tactaa
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