Oncorhynchus tshawytscha (Chinook salmon): 112238442
Help
Entry
112238442 CDS
T05605
Name
(RefSeq) RNA binding protein fox-1 homolog 2 isoform X1
KO
K14946
RNA binding protein fox-1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
otw03041
]
112238442
Spliceosome [BR:
otw03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
112238442
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_8
Motif
Other DBs
NCBI-GeneID:
112238442
NCBI-ProteinID:
XP_042159977
LinkDB
All DBs
Position
LG02:complement(71937988..71974798)
Genome browser
AA seq
476 aa
AA seq
DB search
MLMSTDVTSIMLPVSRAIMDRDRELQDTMAGVHPNSTGASGAVRGMKRGDPASDAQTSAA
LVESAGAECKRPRIDASGVVAEVGQNNDPLTLGYHGYPTHSQGSQDSAGGQEGLVPPSFS
TFPPPPPPPPQNGLALEYGASLYAAGAIQGSVEAGQAGLNPPTSVPNSLTTHQSDVSSQI
DTQLVCTGGGGGGGSVGDDSEKGTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFN
ERGSKGFGFVTFETSADAEKARAALHGTLVEGRKVEVNNATARVMTNKKMVTPYSNGGEG
LAALPYGLLNANSPTAGWKLSPMVGAMYSPELYTDFSGLSLSVPGFPYPAAAAQAATAAA
TFRGAHLRGRGRPVYGAVRAALPQQAIPTYPGVMYQEGFYGAADLYGGYAAYRYAQPTAV
AGPAGAAAAAAAAYSDGYGRVYTTDPYHAALNPAAAYGVGAMATLYRGGYSRFAPY
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgttaatgtcgaccgacgtaacatcaatcatgctgcctgtatctcgggctatcatggac
cgggatcgagagctccaggacacaatggccggggtgcatcccaactcgaccggggcttct
ggcgctgtccggggaatgaagcgaggagacccagcatctgacgcgcagacgtcggcagct
cttgtggaatcggccggggcagagtgcaagcgtccccggattgacgcatctggagtagtc
gcagaggtcggccagaacaatgaccccctgacccttggttaccatggatacccaacccac
agtcagggctctcaggattcagcaggtggtcaagagggtctcgtccccccatccttctcc
accttcccccctcctccccctccgcccccccagaacggcttggccctggagtacggggcc
agtctgtacgccgcaggggccatccaggggtcggtggaggccggacaggcaggccttaac
cccccgacaagtgtcccaaacagcttaaccacccaccagtcagatgtgtcgtcacagatt
gatacccagttggtgtgtacaggaggaggtggtggcggggggtccgtaggggacgactca
gagaaggggacccccaaacgcctccacgtctccaacattcccttccgcttcagagaccct
gacctccggcagatgtttgggcaatttggaaagatcctcgacgtagagatcatattcaac
gagagaggatcgaagggttttggctttgtgacgtttgagacgagtgcagacgctgagaag
gccagagccgctctccacggaactctggtggaaggacgcaaggttgaggtcaacaacgcc
acagccagggtgatgaccaataagaaaatggtcaccccatattcaaatggaggagagggg
ctcgccgctctaccttatgggctactaaatgccaactcccctacagccgggtggaagttg
agtccaatggttggagccatgtacagtccagagctctatacagatttctctggcctgtct
ctctcagtccctggcttcccgtaccctgcggcggctgcacaggctgccacagcggcggcg
acctttagaggcgcccacctccggggtcgtggccggccggtctacggtgctgtcagggca
gccctaccccagcaagctatacctacatacccaggtgtgatgtatcaggaagggttttac
ggtgcagcagacctctatggtggctatgctgcgtatcgctacgctcagccgactgcggta
gctggtcctgcaggagcagcggctgccgcagcagctgcctacagtgatggctacggacgg
gtgtacacgacagacccttaccacgctgcactaaaccctgctgcagcctatggtgtagga
gctatggccacactgtacaggggaggctacagtagatttgcgccctactaa
DBGET
integrated database retrieval system
