Oncorhynchus tshawytscha (Chinook salmon): 112240008
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Entry
112240008 CDS
T05605
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-binding cassette sub-family C member 9-like
KO
K05033
ATP-binding cassette subfamily C (CFTR/MRP) member 9
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
112240008
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
otw02000
]
112240008
04147 Exosome [BR:
otw04147
]
112240008
Transporters [BR:
otw02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC8, 9 subgroups
112240008
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
112240008
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_23
RsgA_GTPase
nSTAND1
AAA_25
HCMV_UL124
DUF3899
Motif
Other DBs
NCBI-GeneID:
112240008
NCBI-ProteinID:
XP_042172342
LinkDB
All DBs
Position
Unknown
AA seq
1621 aa
AA seq
DB search
MAGLSFCGNNVTKNAYSVDTGMLNNGCFVDALNLVPHVFLLFITFPILFIGWGSQSSKVQ
IHHNTWLHFPGHNLRWILTFTLLFVHVCEIAEGIVSNKQMDTNHLHLFMPAFMGFIAATT
SVVYYHNIETSNFPKLLLALFIYWVLAFITKSIKLWKFAEYGVGVLHLRFCITALLVVLY
GLLMAVEINVIRVRRYVFFANPQKVKPPEDLQDLGVRFLQPFVNLLSKATYWWMNPLIIG
AHKRPIELKKIGKLPIAMRALTNYLKLKDAYEDQRQNAEDPEKAPSIWRSMYRAFGRPIL
LSSTFRYLADLLGFAGPLCIYGIVEHLNKKPVKEGSVVPYFEVYFMSSNELLQNTSVLAV
LLFLALVLQRTFLQASYYVTIETGINLRGALLAMIYNKILRLSTSNMSMGEMTLGQINNL
VAIETNQLMWFLFLCPNLWAMPVQIVMGVILLYYLLGTSALIGASVIVLLAPVQYLIATK
LADTQKSTLDQSTERLKKTTEILKGIKLLKLYAWENIFCDSVEDTRGKELTSLRTFALYT
SMSIFMNAAIPIAAVLVTFVSHALINKSKPSSSEAFAALALFHILVTPLFLLSTVVRFAV
KAMVSVQKLGEFLQSDEIGDDSWRNGDMPVSLEACKKHPGATKAINRKQPLLYQMDNYEQ
PARRPLRPNETEDVAVKVNGGFFTWGSNLSTLSDINICIPTGQLTMIVGQVGCGKSSLLL
AMLGEMQTLSGKVYWSKLPVSEMLHEANSCFETDGSFEETRSKNRYSVGYATQKSWLLNA
TVEDNITFGSPFNKQRYKTVIDACSLQPDVDLLPFGDQTEIGERGINLSGGQRQRICVAR
ALYQNTNIVFLDDPFSALDIHLSDHLMQEGILKFLQDDKRTVVLVTHKLQYLIHADWIIA
MKDGSVLREGTLKDIQTHDVELYEHWKTLMNRQDQELEKDTEIDNCQTALERKTLRRXFY
SREAKNQVDDDEEEEEEEEEEDDNMSTTTSRRSKIPWRVCWQYLSSGGFLMVFLMVFSKL
LKHSVMVAIDYWLAEWTANGDVPVNGTANGDVPVNGTANGDANGYAPDFGNVTGDFANAS
AAAVFSNRTNSAAGLPDSYYVPVFIILCGALLLCGIALCLITSLTVEFLGLSAATNLHHN
LLNKIIHAPIRFFDVTPLGQILNRFSADTNIIDQHIPPTLESLTRSTLLCLSAIGVIAFV
TPSFLIALIPLAVSFYFIQKYFRVASKDLQDLDDSTQLPLLCHFSETAEGLTTIRAFRHE
SRFKQKMLELTDTNNTAYLFLSAANRWLEVRTDYLGAVIVLTAAVASIWSSGKSLPSSMV
GLGLTYALTVTNYLNWVVRNLADLEVQMAAVKKVNSFLSTESENYEGSMDTTQVPEDWPQ
HGEIKIQDLCVRYDPLLKPVLKHVNAYINPGQKVGICGRTGSGKSSLSLAFFNMVDVFEG
RIIIDGIDICKLPLQTLRSRLSIILQDPVLFSGSIRFNLDPERTCTDDRLWEALEIAQLK
NMVKALSGGLDAVVTEGGENFSVGQRQLFCLARAFVRKSSILIMDEATASIDMATENVLQ
KVVMTAFADRTVVTIAHRVHTILEADLVIVMKRGNILEMDKPETLLENEDGMFASFVRAD
M
NT seq
4866 nt
NT seq
+upstream
nt +downstream
nt
atggctggcctgtcgttctgtggcaacaatgtgaccaagaatgcctacagtgtggatacg
gggatgttgaacaatggctgcttcgtggacgccctcaacctggtccctcacgtcttcctg
ctcttcatcaccttccctatcctcttcattggctggggcagtcagagctctaaggttcag
atccaccataacacctggctccacttccctggacacaacctgcgctggatcctcacattc
actctgctgtttgtccacgtctgtgagatcgctgagggaatcgtctccaacaaacagatg
gacaccaatcacctccacctctttatgccagcgtttatgggtttcatagcagccactaca
tctgtggtgtactaccacaacatagaaacctccaacttccccaaactactgctggctctg
tttatctactgggttctggcgttcatcaccaagtccatcaagctgtggaagtttgcagag
tacggcgttggagtgctgcacctgaggttctgtatcacagccctgctggtcgttctgtac
ggactcctcatggctgtagagatcaacgtcatcagggtcaggaggtacgtgttcttcgcc
aacccccagaaggtaaagcctccagaggaccttcaggacctgggagtgaggttcctccag
cccttcgtcaacctcctctccaaggccacatactggtggatgaaccccctgattatagga
gcccataaaagacccattgaactgaagaagattggcaaactccccatcgccatgagagcc
ctcaccaactacctgaagctcaaagacgcctacgaggatcagaggcagaatgccgaggac
ccagagaaggctccatccatctggcgttctatgtaccgggcgtttggccgacccatcctc
ctcagcagtaccttccgttacctggcggatctgctgggcttcgcagggccgctctgcatc
tatggcatcgtcgaacatctcaacaaaaagcccgtcaaggaagggagtgtggtcccctat
ttcgaggtctacttcatgtcatccaacgagctgctccagaatacgtcagtgctggctgtt
ctgctgttcctggccctggtgctacagcggaccttcctacaggcctcctactatgtcacc
atagagaccggcatcaacctccgtggagccctgctggcgatgatctacaacaagatcctg
cgtctgtccacctctaacatgtccatgggagagatgaccctgggccagatcaacaacctg
gttgccatagaaaccaaccagctcatgtggttcctcttcctgtgtcccaacctctgggcc
atgccagtgcagattgtgatgggcgtgatcttgctgtactacctgctggggaccagtgct
ctgattggagcttcagtcatcgtgctgctggctccagtccaatacctgatcgctaccaag
ctggctgacacccagaagagcaccctggaccagtctacggaacgtctgaagaagaccaca
gagattctgaaggggatcaagctgctgaagctgtacgcctgggagaacatcttctgtgac
agtgtagaagataccaggggcaaagagctcaccagcctccgcaccttcgcactctacacc
tccatgtctattttcatgaatgctgctatccccatcgctgctgtgcttgtgacgtttgtc
agccacgccctgatcaacaagtccaaacccagctcctcggaggccttcgctgctctggcc
ctcttccacatcctggttaccccactgttcctgctctccaccgtggtccgcttcgcagtc
aaggccatggtcagcgtccagaagctgggtgagttcctgcagagcgatgagattggcgat
gacagctggaggaacggagacatgcctgtgtccctagaggcctgtaagaaacaccctggg
gcgaccaaggctataaacaggaagcagccactgctctaccagatggacaactatgagcag
ccagcacgcagaccactgcgacccaacgagactgaggacgtggctgtcaaggtgaacggt
ggattcttcacatggggaagcaacttgtcaacgttgtccgacatcaacatctgcattcca
acaggtcagctgaccatgatcgtgggccaggtgggttgtgggaagtcgtccctgttgctg
gccatgctgggagagatgcagaccctcagtggaaaggtctactggagcaaactgcctgtg
agtgagatgctgcacgaggccaacagttgttttgagacggatgggtcttttgaagaaacc
aggagtaagaacaggtactctgtgggctacgctacccagaagtcttggctgctgaatgcc
accgtggaggataacatcacgtttggcagtcccttcaacaaacagagatacaagactgtg
attgatgcctgctccctgcagcctgatgtagacctcctgcccttcggagaccagacggag
atcggagagagggggatcaacctgagtggaggccagagacagaggatatgtgtggctcgg
gctctctaccagaacaccaacatcgtcttcctggatgacccgttctcagcgctggacatc
cacctgagtgaccacctgatgcaggagggcatcctgaagttcctacaggatgataaacgc
accgtggtcctggtcacacacaaactgcagtacctcatccacgctgactggatcatagcc
atgaaggatggctcagtgctgagggaaggcactctgaaggacattcagactcatgatgta
gagctgtatgaacactggaagaccctgatgaacagacaggaccaggaactagagaaggac
actgagattgataactgtcagactgctctggagaggaagaccctgagaagangcttctac
tccagagaggccaagaaccaggtcgacgatgacgaagaagaggaggaagaggaggaggaa
gaggacgacaacatgtcgacgaccaccagtcggcgctctaagatcccgtggagggtgtgc
tggcagtacctgtcctctggtggcttcctcatggtcttcctcatggtcttctccaagctg
ctgaaacactccgtcatggtcgccatcgactactggctggccgaatggactgctaatggc
gatgtcccagtcaatgggactgctaatggcgatgtcccagtcaatgggactgctaatggc
gatgctaatggatatgccccagactttggaaatgttacaggagactttgcaaatgcctct
gcagcagctgtcttctccaatcggacaaactcagcggctggtctgcctgactcctactat
gtgccagtgtttatcatcctgtgtggagctctcctactatgtgggatagccctctgtctg
atcacctctctgactgtggagttcctgggtctgtctgctgctactaacctgcaccacaac
ctgctcaacaagatcatccacgcacctatcagattctttgacgtgacccccttgggccag
atcctgaaccgtttctcagctgacaccaacatcatagatcagcacatccctcctaccctg
gagtctttgacccgctccactctgctctgcctgtcagccatcggggtcatagcgttcgtc
accccaagcttcctcatcgctctgattcctctggctgtgtccttctattttatacagaag
tacttccgggtcgcctcaaaggaccttcaggacttagatgactccacccagcttcctctg
ctctgccacttctctgagactgcagaaggactcaccaccatccgagcattcagacatgaa
tctcgattcaagcagaagatgctggagctgacagataccaacaacacagcctacctgttc
ctctctgctgccaaccgctggttggaggtcagaacggactacctgggtgctgtcattgtg
ttaacagcagcagtagcctcaatatggagctctggcaagagccttccctctagcatggtg
gggttaggcctgacctacgccctcacagtgaccaactacctgaactgggtggtgaggaac
ctggctgacttagaggtccagatggctgctgtcaagaaggtcaacagcttcctgagtaca
gagtctgagaactacgaaggctccatggataccacccaggtccccgaggactggccccag
catggagagataaagatccaggatctgtgtgtccgttacgacccccttctgaagcctgtc
ctcaaacacgttaatgcctacatcaaccccggacagaaggtgggcatctgtggacgcaca
ggaagtggaaagtcctccctctctctggccttcttcaatatggtcgacgtgtttgaagga
cggatcatcattgatggtatagacatctgtaagctgcccctccagaccctgaggtctcgt
ctgtccatcatcctccaggacccggtgctgttcagcggatccatccggtttaacctggac
ccagagcgtacctgtactgatgacagactgtgggaggcgctagaaatcgcccagctgaag
aacatggtcaaagccctttctgggggactagacgcggtggtgacagagggaggggagaac
ttcagtgtgggtcagaggcagttgttctgtctggccagagccttcgtcaggaagagctcc
atcctcattatggatgaagccactgcatccatcgacatggcaacggagaatgtcttacag
aaggtggtgatgacagccttcgccgaccgaacagtcgtcactattgcacatcgtgtccac
accatcctggaagctgacctggtgatcgtgatgaagcgagggaacatcttagagatggac
aaaccagagacccttctggagaacgaggacggcatgttcgcttccttcgtcagggctgac
atgtag
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integrated database retrieval system
