Oncorhynchus tshawytscha (Chinook salmon): 112248549
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Entry
112248549 CDS
T05605
Name
(RefSeq) two pore calcium channel protein 1 isoform X1
KO
K16896
two pore calcium channel protein 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
112248549
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
otw04040
]
112248549
Ion channels [BR:
otw04040
]
Voltage-gated cation channels
Calcium channel, two-pore (TPC)
112248549
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
YMF19
Pilin_N
Motif
Other DBs
NCBI-GeneID:
112248549
NCBI-ProteinID:
XP_024273452
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Position
LG04:complement(32149756..32176003)
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AA seq
835 aa
AA seq
DB search
MECSAVQTETPGIHDNSVELTLEESPVLISSFCTELQLDSVDGGGGYDIVNNQVIPTPGP
PPNYSSHNASLQQSWEINYQEAAIYLQEGENNDKFFTHPRNPKALAAYLFAHNHLFYMME
LLTGLLLMVLSLSEAPAVPSLRLDVYVHATLELLALVMVAFELCMKLRWLGFHTFIRHKR
TMVKTCVLLLQFVEAIVVLIRQTSHLRVTRALRPIFLVDCRYCGAVRRNLRQIFQSLPPF
IDILLLLLFFMVIFAILGFCLFSPNTSDPYFNTLENSIVSLFVLLTTANFPDVMMPAYSR
NRWSCVFFIIYLSIELYFIMNLLLAVVFDTFNGVEKMKFKSLMLHKRSAIDHAFQLLVSR
QRPMGLSLKQFDGLMRFYRPRMSARDRFLTYKALNTAGAPMLSLDDFYKFYEVIGLKWKA
RRSGEHWFDDLPHTTFLIFKGINLLVKSKAFQYTMYVVVAVNGVWILVETYMLNSGFSSS
RIVPWSYIVFLTIYGVEVLLKVTGMGPLAYFSSGWNLFDFFVTVFAFLGLIALAFDMEPF
YFIVVLRPLQLLRLFKIKQRYRNVLDTMFELFPRMASLGLTLIIFYYSFAIVGMEFFADV
VYPNCCNTSTVADSYRQINVTIGNRTVLDEGYYYLNNFDNILSSFVTLFELTVVNNWYIT
MEGVTSMTTHWSRLYFMTFYIVTMVVMTIIVAFILDAFVFRMNYSRKNKEPLLDPEDENG
IVFEAEVSRDEALATLELYKQTCPGLSSLNSLQGVLVAMDRSGSSFLVYLGRRSRTKSDL
SMKMYEEEIQEWYAEYSRENLPQSDRSLVERELEIPPPCPDPEPQPNSQGPLSIN
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atggagtgttcggcagtgcagacggagactcctggtatccatgacaacagtgtagagttg
accctggaggagagtccggtcctcatctcctcattctgcaccgagctacagctagatagc
gtggatggaggaggggggtatgacatagtgaataaccaggtgataccaacaccggggcca
ccaccaaactacagttcacacaatgcctcacttcaacaaagctgggagattaactaccag
gaagcagccatctatctacaggaaggagagaacaatgataagttcttcacacatcctcgg
aatccaaaggcgctggcagcatacttgtttgctcacaaccacctgttctacatgatggag
ctgctaacaggactcctactgatggtgctctctctctctgaggctcccgctgtaccatca
ctacgcctggatgtttatgtccacgccactctggagttattggctctggttatggtggcg
tttgaactctgcatgaagctgcgctggctcggcttccacacattcatcagacacaagagg
accatggtgaagacgtgtgtgttgctgctccagtttgtggaggcgatagtggttcttatc
cggcagacgtcacacttgcgtgtgaccagagctctcagacccattttcctggtggactgc
agatactgtggtgccgttcgcagaaacctgcgtcaaatcttccagtcccttccccctttt
atagatatcctgctgctgctgctcttcttcatggtcatcttcgccatcctgggcttctgt
ctgttctcccctaacacttctgatccatacttcaacactctggagaacagcatcgttagt
ctttttgtactactgaccaccgcaaacttcccagacgtgatgatgccagcatactcaagg
aaccgctggtcctgtgtcttcttcatcatctacctttccattgaactctatttcatcatg
aacctgcttctggcagtggtgttcgatacgtttaacggtgttgagaagatgaagtttaaa
tctctgatgctccacaaacgctccgctatcgaccatgccttccaactgctggtcagcaga
cagaggccaatgggtctgtctctgaagcagtttgatggtctaatgcgtttctacagaccc
cgtatgtctgccagagaccgcttcctcacatacaaggccctaaacactgcaggagcaccc
atgctcagcctagatgacttctataaattctatgaagtaattggcctcaaatggaaggca
cggcggagcggggaacactggtttgatgatcttccacacactacttttcttatcttcaaa
ggcatcaacctgctggtcaagtctaaagccttccagtacaccatgtatgtggtggtggcc
gtcaacggagtgtggatcctcgtagaaacctacatgttgaatagtggattctcctcgtcc
agaatagtcccctggagctacattgtcttcctcaccatctatggggtggaagtgttgttg
aaggtaacaggcatgggaccgttggcctacttcagctctggctggaacctgtttgacttc
tttgtgacggtgtttgcctttctgggcttgattgctctggccttcgacatggagcccttc
tacttcattgtggtgctcagaccactgcagctactcaggttgtttaagataaagcagagg
tatcgtaacgtgttggacaccatgtttgaactcttcccgaggatggcaagcctggggctg
acattgatcatcttctactactcctttgccattgtggggatggagttcttcgctgatgta
gtttaccctaactgctgcaataccagtacagtagcagattcatacaggcagatcaatgta
accataggcaataggacggtgctggatgagggttactactatctcaacaacttcgacaac
attctcagcagctttgtgactctgtttgagctgactgtggtaaacaactggtacatcacc
atggaaggagtgacctccatgacaactcactggagccgcctctacttcatgaccttctac
attgtcaccatggtggtgatgaccatcatcgttgccttcatcctggatgcgtttgtgttc
cgtatgaactacagccggaagaacaaagaaccactgttagatcctgaggatgagaacggt
atagtgtttgaggcagaggtgagtcgtgacgaggcgttggctactctggagctttataag
cagacgtgccctggactctcctcactcaactctctacagggagtactggtggccatggac
cgcagcgggagctcgtttctggtgtacttgggtcggaggtcgcggaccaagagtgacctc
agcatgaagatgtatgaggaagagatccaggagtggtatgctgagtactccagagagaac
ctaccccagtcagaccgaagcctcgtagaaagagagctggaaatccctcctccctgccct
gaccctgaacctcaacccaactcacaaggaccacttagtattaactaa
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