Oncorhynchus tshawytscha (Chinook salmon): 112248969
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Entry
112248969 CDS
T05605
Name
(RefSeq) LARGE xylosyl- and glucuronyltransferase 2-like
KO
K09668
glycosyltransferase-like protein LARGE [EC:2.4.2.- 2.4.1.-]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00515
Mannose type O-glycan biosynthesis
otw01100
Metabolic pathways
Module
otw_M00872
O-glycan biosynthesis, mannose type (core M3)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00515 Mannose type O-glycan biosynthesis
112248969
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
otw01003
]
112248969
Glycosyltransferases [BR:
otw01003
]
Glycan extension
O-Glycan
112248969
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_49
Glyco_transf_8
Glyco_transf_24
Motif
Other DBs
NCBI-GeneID:
112248969
NCBI-ProteinID:
XP_042176786
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Position
LG04:51681248..51869591
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AA seq
751 aa
AA seq
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MHLPFRGRLKLLVASLTAVILLTWLYLLAGNLENGRSLLLSPCLSETPEARVLERAVLES
RVREMEEENRQIRLQLNQLQGTAGQPADGGNYGNAAWGASADTGPDDVENTAEERANHTE
CPRSPTILKCELIHVACVCAGHNASRDVVTLVKSILFHRRNPLHFHFITDAVANQILSSL
FQSWMVPSVQVSFYDADELKSEVSWIPNKHYSGIYGLMKLTLTKALPSDLTKVIVLDTDI
TFATDIAELWAIFRKFTDKQVIGLVENQSDWYLGNLWKNHKPWPALGRGFNTGVILLYLE
RLRRIGWEQMWRLTAERELMSMLSTSLADQDIFNAFIKQNPVLVHQLPCFWNVQLSDHTR
SEQCYTEVSDLKVIHWNSPKKLRVKNKHVEFFRNLYLTFLEYDGNLLRRELFGCPSQATS
ESVRLQGALEELDEDDQCYDFRRERITVHRVHLYFLQYEYTPAGDDTDVTLVAQLSMDRL
QMLEAICKHWEGPISLALYMSDAEAQQFLRYAQASEVLKNRKNVGYHIVYKEGQFYPVNL
VRNVALRNANTPYVFLADVDFLPMYGLYDYLRKSVVQLDMAHTKKALVVPAFETLRYRLS
FPKSKAELLSMLDMGTLYTFRYHVWTKGHAPTNYAKWRTATTPYKVEWEADFEPYVVVKR
DCPEYDQRFVGFGWNKVSHIMELDAQEYDLMVLPNAFMIHMPHAPSFDISKFRSSPGYRY
CLQTLKEEFHQDLSRKYGAAALKYLTAQRNI
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgcacctgccatttcgaggtcgtctgaagctgctagtggcatctctgaccgccgtcatc
ctgctcacctggctctacctgctggctgggaacctggagaatgggcgttctctcctcctg
tccccctgtctgtcagagacccccgaggcacgggttctagagcgggcggttctagagtcg
cgggtgcgcgagatggaggaggagaacaggcagatccgcttgcagctcaaccaattgcag
ggcacggctggccagcccgccgacggtggtaactacggcaatgcggcgtggggggcatca
gctgacactgggcccgatgatgtggagaacacggcagaggagagagccaatcacaccgag
tgtccccgttcgcccaccatactgaagtgtgagctgatccatgtagcgtgcgtgtgtgcc
ggtcacaacgccagcagagatgtggtcaccctggtcaagtccatcctgttccacaggaga
aaccctctccatttccacttcatcacagacgcagtagccaatcagatcctgagttctctg
ttccagtcctggatggttccgtctgtacaagttagcttctacgacgcagacgaactcaag
tcggaggtgtcatggatacctaacaagcactactcaggtatctacggcctgatgaagctg
accctaaccaaagcgctgccctctgacctcacaaaagtcatcgtcctggatacggacatc
accttcgccaccgacatcgctgagctctgggccatcttcaggaagttcactgacaagcag
gtgataggtctggtggagaaccagagtgactggtacctggggaacctgtggaagaaccac
aaaccctggcccgccctgggacgaggcttcaacactggggtcatcctgctctacctggag
aggctgcgacggattggctgggagcagatgtggaggctgaccgccgagagagagctgatg
agcatgctcagtacctcgctggcggaccaggacatctttaatgcattcattaagcaaaac
ccagtactagtgcatcagctgccctgcttctggaacgttcagctgtctgaccacacacgc
tctgaacagtgctacacagaggtgtctgacctcaaggtgatccattggaactctcctaag
aaacttcgtgtgaagaacaagcatgtggagttcttcaggaatctctaccttactttcctc
gagtatgatgggaacctactgagacgagagctttttggctgccccagccaggccacctca
gagagcgttcggttacaaggagctctggaggagctagatgaagacgaccaatgttatgac
ttccggcgggagcgaatcacagtgcaccgcgtgcacctctactttctgcagtacgagtac
acgcccgccggggatgacacagacgtcacgctggtcgcacagctctccatggacaggtta
cagatgctggaggccatatgtaagcactgggaaggacctatcagcctggccctgtacatg
tcagacgctgaggcccaacagtttctgcgttacgcccaggcctccgaggtgctgaagaac
cgtaagaacgtgggctaccatatcgtttacaaggagggccagttctaccccgtcaacctg
gtgagaaatgtggccctgaggaacgccaacacaccctatgtgttcctggcagacgttgac
ttcctgcccatgtacggcctctatgattacctcagaaagtcagtggtccagttagacatg
gcccacactaagaaagctctggttgtgccggcctttgagacgctgcgctatcgcctctcc
tttcccaaatccaaagctgagctgctctccatgctggacatggggaccctttacaccttc
aggtatcatgtctggaccaagggccatgctcctaccaactatgccaagtggcggacagcc
accacgccctataaggtggagtgggaggcggactttgagccctatgtggtggtgaagcgg
gactgtcctgagtacgaccagcgctttgttggatttggctggaacaaggtctcccatatc
atggagctagatgctcaggagtatgacctgatggttctgcccaacgcgttcatgatccac
atgccacacgcacccagcttcgacatctccaagttccgctccagcccaggctaccgatac
tgcctgcagaccctaaaagaagagttccaccaagacctgtcccggaagtatggcgcagcc
gccctcaagtaccttactgctcagaggaacatctaa
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