KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112250982
Entry
112250982         CDS       T05605                                 
Name
(RefSeq) RNA polymerase II elongation factor ELL isoform X1
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:otw00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    112250982
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:otw01009]
    112250982
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:otw03021]
    112250982
Protein phosphatases and associated proteins [BR:otw01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     112250982
Transcription machinery [BR:otw03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     112250982
    Little elongation complex (LEC)
     112250982
SSDB
Motif
Pfam: ELL Occludin_ELL CC149 Seryl_tRNA_N
Other DBs
NCBI-GeneID: 112250982
NCBI-ProteinID: XP_024277328
LinkDB
Position
LG05:complement(54707027..54752830)
AA seq 652 aa
MAALKEEQCYGLSCGRVSNGSNVSVFHVKLTDSALKAFEGYQSSKGLSSQPLIRFTGSQG
KISIPWSENPNELRLFTFYLSNVGRDNPQGSFDCIQQYITSEGSIQLDCLGGIQDKITVC
ATDDSYQKARQSMAQAEEETRSRGAIVIKPGGRYVGKKVQIRKPAPGLSDIAPSRRTSRP
VIISSSAAKKSTAQQRPLRERLTHLLALKPYRKPELILRLQKDGLLPFDKDSLDSLLQQV
ANLNVRDNTFTLKDSLFKDIQKDWPGYTEGDQQLLKRILVRKMCQAQCQTPSTTTVAPPA
EVPLPVSPPKELASSSPSQKRPASDFIDPLANKKPRISHMANKTVVPINGKPSSSNGKEG
SGAMVVAPAVEGMTSSSQLPLLDIHRPFDPLSDVSNDSSHNGRDCEGQEAAVAERLSQPP
VFSGPTVLSVPTLGLSSLGHTGLDGPQSKSTLPSLHGKSKKKSKKHKDKEKSKEKEGRGR
AREERKGAEERVPEPRKACDITSSPENLKSSSIPHSSTDLNGMCNNTSVPSSSTEMADYL
LEYTVIGSSEQRQTYKNYFNTEYSEYRGLHARIEGITRQFTVLDTELKQLQQGTDKYKTI
HNQILQEYRKIKKTNPNYSQEKNRCEYLHSKLSHIKKLIAKYDQQQLQNWTG
NT seq 1959 nt   +upstreamnt  +downstreamnt
atggcggcgttgaaggaggagcagtgctacggattgtcctgtggacgagtgagcaatggc
agtaatgtctccgtttttcacgtaaaactcactgacagcgccttgaaagcatttgaaggt
tatcagagcagcaagggcctgtcttcacaaccactgatacgatttactggaagccaaggg
aaaatatcaataccgtggtcggaaaatccgaatgagctgcgactgtttactttctacttg
tccaatgtgggtagagacaacccacagggcagctttgactgcatccagcagtacatcacc
agtgaggggagcattcagctggactgcctgggtggaatccaggacaagatcacggtgtgt
gccacggacgactcttaccagaaggccaggcaaagcatggctcaggcagaggaggagacc
cgcagcaggggtgcgattgtcatcaagcctggggggagatacgtgggtaagaaggtgcag
atccggaaaccggcacctgggctgtctgacatcgctccttcgcggcggacgtcgcggcct
gtcatcatctctagcagtgcggcgaagaagagcacggcgcagcagaggcccctgagggag
cgcctcacccacctgctggccctcaagccttacagaaagcctgagctcatcctgcgcctg
cagaaggatggcctcttgccctttgacaaggactctctggacagcctcctgcaacaggtg
gctaacctaaatgtgagagacaacaccttcacattgaaggactctttgttcaaggacatt
cagaaggactggccaggctacactgagggagaccagcaacttctgaagaggatccttgtt
cggaaaatgtgtcaggcccagtgtcagactccaagcaccaccacagtggctcctccagct
gaggtcccactcccagtgagccctcccaaagagctggctagcagctccccatcgcagaaa
cgacctgcttcagatttcatcgatcctctggccaacaaaaagcccaggatatcacacatg
gctaacaaaacagtggtgccaataaatggcaagccgagttcgtccaatggaaaggagggg
agtggggcaatggttgtggcgccagcggttgaaggcatgacatccagctcccagctcccc
ctacttgacatccaccggcccttcgacccactctccgacgttagtaacgactccagccac
aatggccgggactgtgagggccaagaggccgctgtagcagagagactgagccagccacca
gtcttctctgggcccacagtgctgtctgtaccaaccctgggcctctcgtccctcggacac
accggcctcgatgggccccagagcaagagcaccttgccctccctgcacggcaagtccaag
aagaagtccaaaaaacacaaagacaaggaaaagtccaaagagaaggaagggagggggaga
gcgagagaggagaggaaaggagcagaggagcgtgttcctgagccaagaaaagcctgtgac
atcacctccagccctgagaacctgaagagcagtagtattccacacagcagcacagatctc
aatggaatgtgcaacaacaccagtgttccttcgtcatcgactgagatggcagactattta
ttggagtatacagtgattggctcttccgagcagcgtcaaacatacaagaattactttaat
actgagtatagtgagtaccggggcctccacgctcggatagagggcatcacccggcagttc
actgtgctcgacactgagcttaagcagctccaacaaggcacagacaagtacaagacaatc
cacaaccagatactccaagagtatcgtaaaataaaaaagacgaatccaaactatagccaa
gagaagaaccgctgtgaatatctacacagcaaactgtcacatataaagaaacttatagca
aagtatgatcaacagcaacttcaaaactggactggttga

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