Oncorhynchus tshawytscha (Chinook salmon): 112251496
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Entry
112251496 CDS
T05605
Name
(RefSeq) uncharacterized protein LOC112251496
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_2
GPS
EF-hand_10
Motif
Other DBs
NCBI-GeneID:
112251496
NCBI-ProteinID:
XP_042178630
LinkDB
All DBs
Position
LG05:25636777..25666926
Genome browser
AA seq
3158 aa
AA seq
DB search
MAITKNGLSVLVLLVTCSVLETREFLEISSLFSQAFNTEYNPHLSHVREKRAVLSNRWNY
IIEVEVNVSDIKTIEQMKSAVNSTSLPLTINNSTEISDVHITTVCYPNGTGFQCRCEDQY
RWSYNNCVTYGSCDDITGETCGCINANPADGQYCQPYTKPVTLLEYFVEVEVNVNDLKAI
DEPKNLLKNLSLPFALSSMINITDLNITTVCFPNGTGFQCRCEDQYRWSCDQCVSFGNCD
DITSDTCGCINAIPPDGQYCQSVHHQNFTACPTTTASPTTVPTVPPTLYEYMIEIELNTT
DVTVIDQLRAILRNAIYPVRINNLIQITGVNMSTVCFPNGTGFQCRCEDQYRWSCDQCVS
YGNCDDITSETCGCINAIPPDGQYCQSVHHQNFTACPTTTASPTTTTISPTTDPTVPPTL
YEYMIEIELNTTDVTVIDQLRAILRNAIYPVRINNLTQITGVNMSTVCFPNGTGFQCRCE
DQYRWSCDQCVSFGNCDDITSDTCGCINAIPPDGQYCQSVHHQNFTACPTTTASPTTVPT
VPLTLYEYMIEIELNTTDVTVIDQLRAILRNAIYPVRINNLIQITGVNMSTVCFPNGTGF
QCRCEDQYRWSCDQCVSYGNCDDITSETCGCINAIPPDGQYCQSVHHQNFTACPTTTASP
TTTTISPTTDPTVPPTLYEYMIEIELNTTDVTVIDQLRAILRNAFTLLQFCFPNGTGFQC
RCEDQYRWSCDQCVSFGNCDDITSDTCGCINAIPPDGQYCQSVHHQNFTACPTTTASPTT
VPTVPLTLYEYMIEIELNTTDVTVIDQLRAILRNAIYPVRINNLIQITGVNMSTVCFPNG
TGFQCRCEDQYRWSCDQCVSYGNCDDITSETCGCINAIPPDGQYCQSVHHQNFTACPTTT
ASPTTTTISPTTDPTVPPTLYEYMIEIELNTTDVTVIDQLRAILRNAIYPVRINNLTQIT
GVNMSTVCFPNGTGFQCRCEDQYRWSCDQCVSFGNCDDITSDTCGCINAIPPDGQYCQSV
HHQNFTACPTTTASPTTVPTVPLTLYEYMIEIELNTTDVTVIDQLRAILRNAIYPVRINN
LIQITGVNMSTVCFPNGTGFQCRCEDQYRWSCDQCVSYGKCDDITSDTCGCINAIPPDGQ
YCQSVHHQNFTACPTTTASPTTTTISPTTVTTVPPTLYEYMIEIELNTTDVTVIDQLRAI
LRNAIYPVRINNLIQITGVNMSTVCFPNGTGFQCRCEDQYRWSCDQCVSYGKCDDITSDT
CGCINAIPPDGQYCQSVHHQNFTACPTTTASPTTDSTSPEASTTEQITTVDNTTQLITVT
NSTTPEASTTEQITTVDNTTQLITVTIPTVPLTLYEYMIEIELNTTDVTVIDQLRAILRN
AIYPVRINNLTQITGVNMSTVCFSNGTGFQCRCEDQYRWSCDQCVSYGKCDDITSDTCGC
INAIPPDGQYCQSVHHQNFTACPTTTASPTTDSTTPEASTTEQITTVDNTTQLITVTNST
TPVASTTEQITTVNNTTQLITVTIPTVPLTLYEYMIEIELNTTDVTVIDQLRAILRNAIY
PVRINNLIQITGVNMSTVCFPNGTGFQCRCEDQYRWSCDQCVSYGKCDDITSDTCGCINA
IPPDGQYCQSVHHQNFTACPTTTASPTTDSTTPEASTTEQITTVDNTTQLITATNSTTPE
ASTTEQITTVDNTTQLITVTNSTTPEDSTTEQITTADPTTQLTTVTNSTTPEDSTTEQIT
TADPTTQLPTVTNSTTPEVSTTEQITTVDNTTQLITVTNSTTPEDGTTEQITTVDNTTQL
ITVTNSTTPEDSTTEQITTADPTTQLPTVTNSTTPEASATEQITTVDNTTQLITVTNSTT
PEASTKEQITTVDNTTQLITVTKASTTEQSTTPDPTTQLTTVTNSTTPEASTKEQITTVD
NTTQLITVTKASTTEQSTTPDPTTQLTTVTNSTTPEASTKEQITTVDNTTQLITVTKAST
TEQSTTLDPTTQLTTVTNSTTPEASTKEQITTVDNTTQLITVTKASTTEQSTTLDPTTQL
TTVTNSTTPEASTTEQITTVDNTTQLITVTKSTTPEASTREQITTVDNTTQLTTVTNSTT
PEASTTEQMTKVTNSTTTPPTTGQSTTADPTTQLTTVTNFTTPAATTNQTTTVDPTTQPT
TDTGTTVTTEPPLATTKTTPPTTIPPTTTIPPTTTIPPPPTTPPPTTKPADILLLAMSFK
MNEEFTNELNDKNSVKYQKYKGDIEPVIQAQYRKNMPGFISATLTSFSRGSVIANFDVRT
TAADPTAINKANAGLATSLPALYQVDISSFNIIYSSSTVLRYKPTTIYTDGTMTLECGPP
PDTVKMGTIKSVEWKRKGRVLTSTGRFTINTDDFASKKTTLGIKNVIADDKGEYECTLKS
DEIYFYQRGQIDIKDAPIIQTKTEINTHCSAGNSQPLECCVQTPYKLMWKEGDVELPTNE
TPDNCIKYNYQIQNCDVSSKVVTLTCQVKDPTGYEKTTKLTIFVGDIICYDQEYGSGQEK
DTSVALCKKGEDGRKTAICKSGHWIPQTDTCVLTAINELLISSQDLKEATVEEFLTKLNN
TAVDLKEKIVSSSATISTIVDILRIVASVSKNISQSEIKNILETVNVLVSDEAKESWVFL
NADQNKNTSSSLLGSMEFFAGSLPTTSFNVTTNLIQLNQDTFDNSFSTNLSSSVLIEIPE
TNSNHLTITTLTFRTLRNVLPARNGSNQSANDNTINGVVVMVKLNGTTKNVSLSFDKLNK
SLTFNPQCVFWNFSLFNSLGGWDDTGCKLKSNEKGKVTCHCNHLTSFSILMSTSIPKEIQ
DALDIITYVGVGISMGSLVICLIIEACVWKAMTRNNTSYMRHVSIVNIAVSLLIADIWFI
IGASISKNTLENPGEDTTTPIPACTAATFFIHFFYLALFFWMLISGLLLFYRTILVFSHM
SKSTMLAIGFSVGYGAPLIIAVVTVAATAPSGGYIKENQACWLNWDKTMALLAFVIPALT
IVVINFLILIVVLYKMLRRGVGDATQPDERNAVVVIARCLAILTPFFGLTWGLGVGTMVD
PTNKGIHVVFALFNSLQGFFVLVFGTLLDGKIRSAIVGTFSSILPGSDRTRSTSGGAATS
STSALNFIRRRIRRNVYNVSEVANSSNSTGATESFINT
NT seq
9477 nt
NT seq
+upstream
nt +downstream
nt
atggcaataacaaagaatgggctgagtgtccttgttctcctggtgacatgctctgttttg
gaaacacgggaattccttgagatttccagccttttttcacaggcattcaacacagagtac
aacccacatctgtcacatgttagggaaaaaagagcagtattatccaatcgatggaactac
ataattgaagttgaagtgaacgtgtcagacatcaaaacaatagagcaaatgaagtcagct
gtgaattcaacaagtcttcccctcactatcaacaactccactgaaatctctgacgtacac
atcactactgtgtgctacccaaatggtactggattccagtgcagatgtgaggaccagtat
cgttggtcatataacaactgtgtcacatatggatcctgtgatgacatcactggtgaaaca
tgtggatgtatcaatgccaatccagctgatggacagtactgccagccatacacaaaacct
gtaactcttctggagtactttgtggaagttgaggtcaatgtcaatgacttaaaagccata
gacgaaccgaagaaccttctgaaaaacctcagtttaccattcgcacttagtagcatgatc
aacatcactgatctcaacattactacagtttgcttcccaaatggtactggattccagtgc
agatgtgaggaccagtatcgttggtcatgtgaccagtgtgtctcttttgggaattgtgat
gacatcacatctgacacgtgtggatgtatcaatgccattcctccagatggacagtactgc
cagtctgttcaccaccaaaactttacagcatgtccaacaacaacagcctctcctacaaca
gttccaacagtaccaccgactctctatgagtacatgattgaaattgaactgaacaccaca
gacgttacagtgatagatcaactgagagccattctgagaaatgctatttaccctgtcaga
atcaataatctgatacaaatcactggtgttaacatgtctacagtttgcttcccaaatggt
actggattccagtgcagatgtgaggaccagtatcgttggtcatgtgaccagtgtgtctct
tatgggaattgtgatgacatcacatctgaaacgtgtggatgtatcaatgccattcctcca
gatggacagtactgccagtcggttcaccaccaaaacttcacagcatgtccaacaacaaca
gcctctcctacaacaacaacaatctctcctacaacagatccaacagtaccaccgactctc
tatgagtacatgattgaaattgaactgaacaccacagacgttacagtgatagatcaactg
agagccattctgagaaatgctatttaccctgtcagaatcaataatctgacacaaatcact
ggtgttaacatgtctacagtttgcttcccaaatggtactggattccagtgcagatgtgag
gaccagtatcgttggtcatgtgaccagtgtgtctcttttgggaattgtgatgacatcaca
tctgacacgtgtggatgtatcaatgccattcctccagatggacagtactgccagtctgtt
caccaccaaaactttacagcatgtccaacaacaacagcctctcctacaacagttccaaca
gtaccactgactctctatgagtacatgattgaaattgaactgaacaccacagacgttaca
gtgatagatcaactgagagccattctgagaaatgctatttaccctgtcagaatcaataat
ctgatacaaatcacaggtgttaacatgtctacagtttgcttcccaaatggtactggattc
cagtgcagatgtgaggaccagtatcgttggtcatgtgaccagtgtgtctcttatgggaat
tgtgatgacatcacatctgaaacgtgtggatgtatcaatgccattcctccagatggacag
tactgccagtcggttcaccaccaaaactttacagcatgtcccacaacaacagcctctcct
acaacaacaacaatctctcctacaacagatccaacagtaccaccgactctctatgagtac
atgattgaaattgaactgaacaccacagacgttacagtgatagatcaactgagagccatt
ctgagaaatgcttttaccctacttcaattttgcttcccaaatggtactggattccagtgc
agatgtgaggaccagtatcgttggtcatgtgaccagtgtgtctcttttgggaattgtgat
gacatcacatctgacacgtgtggatgtatcaatgccattcctccagatggacagtactgc
cagtctgttcaccaccaaaactttacagcatgtccaacaacaacagcctctcctacaaca
gttccaacagtaccactgactctctatgagtacatgattgaaattgaactgaacaccaca
gacgttacagtgatagatcaactgagagccattctgagaaatgctatttaccctgtcaga
atcaataatctgatacaaatcacaggtgttaacatgtctacagtttgcttcccaaatggt
actggattccagtgcagatgtgaggaccagtatcgttggtcatgtgaccagtgtgtctct
tatgggaattgtgatgacatcacatctgaaacgtgtggatgtatcaatgccattcctcca
gatggacagtactgccagtcggttcaccaccaaaactttacagcatgtcccacaacaaca
gcctctcctacaacaacaacaatctctcctacaacagatccaacagtaccaccgactctc
tatgagtacatgattgaaattgaactgaacaccacagacgttacagtgatagatcaactg
agagccattctgagaaatgctatttaccctgtcagaatcaataatctgacacaaatcact
ggtgttaacatgtctacagtttgcttcccaaatggtactggattccagtgcagatgtgag
gaccagtatcgttggtcatgtgaccagtgtgtctcttttgggaattgtgatgacatcaca
tctgacacgtgtggatgtatcaatgccattcctccagatggacagtactgccagtctgtt
caccaccaaaactttacagcatgtccaacaacaacagcctctcctacaacagttccaaca
gtaccactgactctctatgagtacatgattgaaattgaactgaacaccacagacgttaca
gtgatagatcaactgagagccattctgagaaatgctatttaccctgtcagaatcaataat
ctgatacaaatcacaggtgttaacatgtctacagtttgcttcccaaatggtactggattc
cagtgcagatgtgaggaccagtatcgttggtcatgtgaccagtgtgtctcttatgggaaa
tgtgatgacatcacatctgacacgtgtggatgtatcaatgccattcctccagatggacag
tactgccagtctgttcaccaccaaaactttacagcatgtcccacaacaacagcctctcct
acaacaacaacaatctctcctacaacagttacaacagtaccaccgactctctatgagtac
atgattgaaattgaactgaacaccacagacgttacagtgatagatcaactgagagccatt
ctgagaaatgctatttaccctgtcagaatcaataatctgatacaaatcactggtgttaac
atgtctacagtttgcttcccaaatggtactggattccagtgcagatgtgaggaccagtat
cgttggtcatgtgaccagtgtgtctcttatgggaaatgtgatgacatcacatctgacacg
tgtggatgtatcaatgccattcctccagatggacagtactgccagtctgttcaccaccaa
aacttcacagcatgtccaacaacaacagcctctcctacaacagactctacatcacctgag
gccagcactacagaacaaattactacagttgataacacaacacaactgatcacagttacc
aactctacaacacctgaggccagcactacagaacaaataactacagttgataacacaaca
caactgatcacagttaccattccaacagtaccactgactctctatgagtacatgattgaa
attgaactgaacaccacagacgttacagtgatagatcaactgagagccattctgagaaat
gctatttaccctgtcagaatcaataatctgacacaaatcactggtgttaacatgtctaca
gtttgcttctcaaatggtactggattccagtgcagatgtgaggaccagtatcgttggtca
tgtgaccagtgtgtctcttatgggaaatgtgatgacatcacatctgacacgtgtggatgt
atcaatgccattcctccagatggacagtactgccagtctgttcaccaccaaaacttcaca
gcatgtccaacaacaacagcctctcctacaacagactctacaacacctgaggccagcact
acagaacaaattactacagttgataacacaacacaactgatcacagttaccaactctaca
acacctgtggctagcactacagaacaaataactacagttaataacacaacacaactgatc
acagttaccattccaacagtaccactgactctctatgagtacatgattgaaattgaactg
aacaccacagacgttacagtgatagatcaactgagagccattctgagaaatgctatttac
cctgtcagaatcaataatctgatacaaatcactggtgttaacatgtctacagtttgcttc
ccaaatggtactggattccagtgcagatgtgaggaccagtatcgttggtcatgtgaccag
tgtgtctcttatgggaaatgtgatgacatcacatctgacacgtgtggatgtatcaatgcc
attcctccagatggacagtactgccagtctgttcaccaccaaaacttcacagcatgtcca
acaacaacagcctctcctacaacagactctacaacacctgaggccagcactacagaacaa
attactacagttgataacacaacccaactgatcacagctaccaactctacaacacctgag
gccagcactacagaacaaataactacagttgataacacaacacaactgatcacagttacc
aactctacaacacccgaggacagcactacagaacaaattactacagctgaccccacaaca
caactgaccacagttaccaactctacaacacccgaggacagcactacagaacaaattact
acagctgaccccacaacacaactgcccacagttaccaactctacaacacctgaggtcagc
actacagaacaaataactacagttgataacacaacacaactgatcacagttaccaactct
acaacacctgaggacggcactacagaacaaataaccacagttgataacacaacacaactg
atcacagttaccaactctacaacacccgaggacagcactacagaacaaattactacagct
gaccccacaacacaactgcccacagttaccaactctacaacacctgaggccagcgctaca
gaacaaataactacagttgataacacaacacaactgatcacagttaccaactctacaaca
cctgaggccagcactaaagaacaaataaccacagttgataacacaacacaactgatcaca
gttaccaaggccagcactacagaacaaagtactacacctgatcccacaacacaactgacc
acagttaccaactctacaacacccgaggccagcactaaagaacaaataaccacagttgat
aacacaacacaactgatcacagttaccaaggccagcactacagaacaaagtactacacct
gatcccacaacacaactgaccacagttaccaactctacaacacccgaggccagcactaaa
gaacaaataaccacagttgataacacaacacaactgatcacagttaccaaggccagcact
acagaacaaagtactacacttgatcccacaacacaactgaccacagttaccaactctaca
acacccgaggccagcactaaagaacaaataaccacagttgataacacaacacaactgatc
acagttaccaaggccagcactacagaacaaagtactacacttgatcccacaacacaactg
accacagttaccaactctacaacacccgaggccagcactacagaacaaataactacagtt
gataacacaacacaactgatcacagttaccaaatctactacacctgaggccagcactaga
gaacaaataactacagttgataacacaacacaactgaccacagttaccaactctacgaca
cctgaggccagcactacagaacaaatgaccaaagttaccaactctacaacaactcccccc
acaacaggacaaagtactacagctgaccccacaacacaactgaccacagttaccaacttt
actacacctgcagctacaacaaatcagaccactacagttgaccccacaacacaaccgacc
acagacactggaactacagtaactactgaaccaccactagcaactacaaaaacgacacca
ccaacaacaataccaccaacaacaacaataccaccaacaacaacaataccaccaccacca
acaacaccaccaccaactacaaaaccagctgatattctgttgctggcgatgtccttcaaa
atgaatgaagagttcaccaacgaactaaatgataaaaatagtgtcaaataccaaaagtac
aaaggcgatattgaaccagttatccaggcccagtataggaagaacatgccagggtttatt
tcagcaacattgacaagtttcagccgtggaagtgttatagccaactttgatgttaggacc
acagctgcagatcccactgcaattaacaaagctaatgctggacttgcaacatcacttcca
gctttgtatcaagttgatattagctctttcaatattatttatagcagtagcacagtatta
aggtataaaccaactaccatttacactgatggcaccatgactctggagtgtggaccacct
cctgatactgtaaagatgggtactattaaaagcgttgagtggaaacgaaagggaagagtt
ttaacatcgactggaaggttcaccatcaatacagatgattttgcatcaaaaaagacaaca
cttggtatcaaaaatgtaattgctgatgataaaggggaatatgaatgcactctgaagagt
gacgaaatctatttctaccaaaggggtcaaattgacatcaaagatgctcccattattcaa
acgaagacagaaatcaatacccattgttcggcggggaatagtcagccattggagtgttgt
gtgcagactccctataaactaatgtggaaagaaggcgatgtagaattgcccacaaatgag
actcctgacaattgcattaaatataactatcaaattcaaaactgtgatgtatcatccaaa
gttgtcacattaacatgccaagtgaaagacccaacaggatatgaaaagactacaaaattg
actattttcgtaggagatataatttgctacgatcaggaatatggtagtggccaagagaaa
gacacatcagtggcactatgtaagaaaggtgaggatggaagaaagacagcgatttgtaaa
agtggacattggatacctcagactgacacttgtgtcttgactgcaatcaatgagctactg
atctcatctcaggacttgaaagaggcaacagttgaagaatttttaacaaaacttaataat
accgctgttgatctaaaagagaaaatcgttagttcaagtgcaactatttcgaccattgtt
gatattctgagaattgttgcaagcgtttcaaagaatatcagccagtctgagataaagaac
attctagaaacagtgaatgtcctagtttctgatgaagcaaaagaatcctgggtctttctc
aatgccgaccaaaataagaacaccagctctagtttactgggctccatggaattttttgca
ggttctctcccaacgacgtcctttaatgtgacaacaaatctaattcagttaaaccaagac
acatttgacaactcattcagcacaaacttaagttcaagtgtgttaatagagattccagag
actaattccaatcacctcaccatcaccactctaacgttccgcaccctcagaaatgtgtta
cctgccaggaatggcagcaaccaaagtgccaatgacaacaccatcaatggtgttgtagtg
atggtgaagttgaatggaacgactaaaaatgtctcattgagcttcgacaagttgaacaag
tcgctcacattcaatcctcagtgtgttttctggaacttcagcctttttaacagccttgga
ggatgggatgacacaggatgtaaactgaagtctaatgagaagggcaaggtcacctgtcac
tgtaaccatctgacctccttctccattttgatgtcaacttccattccgaaagagattcaa
gatgctttggatataatcacttatgttggagttggcatatcgatgggtagcttagtcatt
tgtctcatcattgaggcttgtgtatggaaggccatgaccagaaacaacacctcttacatg
cgccatgtctccattgtgaacatcgctgtgtctctcctgattgccgacatttggttcatt
attggtgcatcaatatcaaaaaatacccttgaaaacccaggcgaagacaccacaacacct
ataccggcatgtactgcagctacgtttttcattcactttttctaccttgctctgttcttt
tggatgctgatctcaggccttctccttttctaccggaccatcttggttttctcccatatg
tcaaaatcaactatgctggctattggcttctcagtaggctatggggcacctcttatcatt
gctgttgttactgtggcagcaacagctcctagtggtggatacatcaaggaaaaccaggca
tgttggctcaactgggacaagacaatggctctccttgcttttgtgatccctgccctgacc
atagtggtcatcaactttttgatcctgattgtggttctgtacaaaatgctgaggagaggg
gtgggggatgctacccagccagatgagagaaatgctgttgtggtcattgccaggtgtctg
gccattctgactccattctttggccttacctggggactgggagtaggaaccatggttgat
ccaacaaataagggaatccatgttgtatttgccctcttcaattcactacagggtttcttt
gttttggtgtttggaacacttttagacggcaagatccggtcagctatagtaggaacgttc
tcttccatcctcccaggctctgaccgtacgaggagtactagtggtggcgcggcaacatca
tcaaccagtgcattaaacttcatccgaagaaggataaggaggaatgtctacaatgtttcg
gaagttgcaaattcttccaacagcactggtgctacagagtctttcatcaacacctaa
DBGET
integrated database retrieval system
