Oncorhynchus tshawytscha (Chinook salmon): 112252797
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Entry
112252797 CDS
T05605
Symbol
tial1
Name
(RefSeq) nucleolysin TIAR isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112252797 (tial1)
03041 Spliceosome [BR:
otw03041
]
112252797 (tial1)
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
112252797 (tial1)
Spliceosome [BR:
otw03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
112252797 (tial1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
PHM7_cyt
Nup35_RRM_2
Nup35_RRM
Toxin-deaminase
Motif
Other DBs
NCBI-GeneID:
112252797
NCBI-ProteinID:
XP_024280174
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All DBs
Position
LG06:complement(60255741..60278956)
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AA seq
406 aa
AA seq
DB search
MEDESHPKTLYVGNLSRDVTEILILQLFTQIGPCKSCKMITEQPDSRRMNSSVGFSVLQQ
SSNDPYCFVEFFEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDL
SPEITTEDIKAAFAPFGKISDARVVKDMTTGKSKGYGFVSFYNKLDAENAIVHMGGQWLG
GRQIRTNWATRKPPAPKNVQDNGSKQLRFEDVVNQSSPQNCTVYCGGIQSGLSEHLMRQT
FSPFGQIMEIRVFPEKGYSFIRFSSHESAAHAIVSVNGTSIECHIVKCYWGKESPDMAKS
VPQVEYGQGQWGQWNQMYGSPQAQQYGQQYMANGWQVPSYGVSYGQSWNQQGFGVEDSIL
AAAAQNISRQSQSPAWVGGFGSPAPSQPGPVMPNQGNFNMAGYQTQ
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgaaagccaccccaaaacgctgtatgttggtaacctgtccagagatgtaaca
gaaattttgattcttcagctgttcacccaaattggaccttgcaaaagttgtaaaatgatc
actgagcaacccgatagcaggaggatgaactcttctgtgggattttctgttttgcagcag
tcaagcaatgacccttattgctttgtggagttctttgaacatagagatgctgctgctgcc
ctagcagccatgaatgggaggaagatattgggaaaggaggtcaaagtaaattgggccacc
actccaagtagccagaagaaagatacatcaaatcacttccatgtgtttgtgggagacttg
agccctgagatcaccactgaggatatcaaagctgcatttgcaccttttgggaaaatatcg
gatgctcgtgttgtgaaggacatgacgacaggaaaatctaaggggtatggatttgtgtcc
ttctataacaaactggatgcagagaatgccatcgtgcacatggggggacagtggttagga
ggacggcagatcaggaccaactgggcaactcgcaagccacccgcccccaaaaatgtgcaa
gacaatggctcgaagcagctgaggtttgaagatgtagtgaaccaatccagtccccagaac
tgcactgtgtattgcggaggaatccagtcaggactgtcagagcacctcatgcgacagact
ttctcaccctttggacaaataatggaaatccgagttttcccagagaaaggttactctttc
atcaggttttcctcccatgaaagtgctgcccatgcaattgtctctgtaaatggaacgtcc
attgaatgccacatagtgaagtgctactggggcaaagaatcccccgacatggccaaaagc
gtaccacaggtggagtacggtcagggtcagtggggacagtggaaccaaatgtatgggagc
ccccaggcccagcagtatgggcaacagtacatggcaaatggttggcaagtgccttcttat
ggagtatcttatggacagtcatggaatcagcaaggatttggtgtagaggattccattctg
gccgcagcagcacagaacatttcaagacagtcccagtccccagcctgggtgggagggttt
ggatccccggcgccgtcccagcccggtcctgtgatgcccaaccagggaaacttcaacatg
gctggctaccagacacagtga
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