Oncorhynchus tshawytscha (Chinook salmon): 112254877
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Entry
112254877 CDS
T05605
Name
(RefSeq) F-box only protein 42 isoform X1
KO
K10317
F-box protein 42
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112254877
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
112254877
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Kelch_3
Kelch_4
Kelch_1
Kelch_5
Kelch_6
Kelch_2
F-box-like
F-box
F-box_5
Motif
Other DBs
NCBI-GeneID:
112254877
NCBI-ProteinID:
XP_024283584
LinkDB
All DBs
Position
LG07:56452371..56484573
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AA seq
722 aa
AA seq
DB search
MRRDNSQDRKPTKEYVQNYGTERMSRSSDSDDGYFVAMDTEEDVSGPVGMAQGEDLKLGT
SRGEGDVEGCNEGEGTMVELPEEVLEYILSFLSPYQEHKTAALVCKQWYRLIKGVAYQCY
HGFLRAVQEGNIQWESRTYPYPGTPITQRFSHSACYYDSNQSMYVFGGCTQSSCNAAFND
LWRLDLNSKEWIRPLASGSYPSPKAGATLVMYNNLLVLFGGWTRPSPYPLHQPERFFDEI
HTYSPSKNWWNCIVTTQGPLPMAGHSSSVIGSDMVVFGGSLGARQMSNEVWVLDLEQWSW
SKPTISGPSPHPRGGQSQIVIDNKTLLILGGCGGPNALLKDAWLLHMGAPPWTWQQLRVE
NDDHGAPELWCHPACRVGQCVVVFSQAPSGRAPLSPSLNSRPSPISASPGPLGPEPPSLR
SQSPLRSGAAGVVLGAVEEAPCVNGRWGTLRPRPSARGGAREGSPGSSPQQPSPSQGPDS
PPLPSLHPLLNGSSPSPRTSPAQDASPPSRPPVSSDYGWESPPSATHPLSEVPSTNGVHT
PPPAPDSPRTPPGAVSPAALRRGLEAVKNLSSSSSSNPLSQGAASGGSGGGVASAGTSPS
SSPPQAAAAGSDGHSIPPIARRLGHHPPQSLNVGKPLYQSLNCKPMQMYVLDVSRAKAAG
LVSWRVYGNGTPAAVTGPPETSLHTVVQGRGELIIFGGLMDKKQNVKYYPKTNALYFVRA
KR
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgagaagagataattcacaagatagaaaaccaactaaagaatacgtgcagaattacggc
acagaaagaatgtcccgctcttcagacagtgatgatgggtactttgttgccatggataca
gaggaagatgtatcagggcctgttggaatggcacagggggaagatctgaaattggggacc
agcagaggagagggggacgtagaaggctgcaatgagggtgaggggacaatggtggagctg
ccggaggaagtcctagaatacatcctgtctttcctctcaccataccaggagcacaagacc
gctgcactggtgtgtaaacagtggtatcgcctcattaaaggtgttgcatatcagtgttac
catggttttctgcgggccgtccaggagggcaatattcagtgggagagtcgtacataccca
tatcctggaacacccatcacgcaacgcttctcacacagtgcatgctactacgactccaac
cagtccatgtatgtgtttgggggctgtactcaaagtagctgcaacgctgccttcaatgac
ctgtggagacttgacctcaacagcaaggagtggatccgccctttagcctcgggctcctat
ccgtctcctaaagcgggtgctaccctggtgatgtacaacaatctgctggtgctgtttggt
ggatggactcgacctagcccatacccactacatcagcctgagaggttctttgacgagatc
cacacatactccccctccaaaaactggtggaactgcatcgtgacaacccaaggaccccta
cccatggccggtcactcctcctccgtcatagggagcgacatggtggtgtttggagggtcg
ctaggggcccgccaaatgagtaacgaggtgtgggttctggatctggagcagtggtcctgg
tccaagcccaccatctcagggccatccccacacccacgaggaggccagtctcagattgtg
attgacaacaagactcttcttattctgggaggctgtggaggccctaatgcactgctgaaa
gatgcctggctcctgcacatgggtgccccaccctggacatggcagcagctgagggtggag
aatgatgaccatggagccccagaactgtggtgccaccctgcttgcagggttggacagtgt
gtagtggtgttctcccaggctccgtctggccgtgcgccactcagccccagcctgaactct
cggccctcccccatcagtgcctctcctggccccctgggcccagagcccccctcactgcgc
tcccagtcccctttaaggagcggcgccgccggggtcgtcctgggggcagttgaggaggcc
ccctgtgtgaacggccgctgggggacactgagaccacgtccctcggccagagggggtgcc
agagagggtagccccggctcctcccctcaacagccatccccctcccaggggcctgacagc
ccgcctctgccctccctccatcctctactcaacggttcatccccctctccccggaccagc
cctgcccaggatgcctccccgccctctcgcccccctgtctcctcggactacggctgggag
tctcccccctcagccacccaccccctttctgaggtacccagcactaacggcgtgcacacg
cctccacctgcccctgactccccacgcactcccccgggggctgtgtcccccgcagccctg
agacgaggcctggaagctgtcaaaaacctgtcctcttcatcctcctcaaaccccttgtcc
caaggagctgcttcaggaggaagtgggggaggagtggcttcagcaggaacatccccctct
tccagcccgccacaggctgctgctgccgggtctgatggacattccatcccgcctatcgca
cggcggcttggccaccacccgccccagagcctgaacgtgggcaagcccctgtaccagtcg
ctcaattgcaagcccatgcagatgtatgtcctggatgtgtcccgagccaaagcagctggt
ctcgtctcctggagggtttacgggaacggcacccccgctgccgtcacaggcccccccgag
accagccttcacactgtggtccagggtaggggcgagctcatcatattcgggggcttgatg
gacaagaagcagaacgtgaagtactaccctaaaaccaacgccttgtactttgtgcgcgct
aagaggtaa
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