Oncorhynchus tshawytscha (Chinook salmon): 112254919
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Entry
112254919 CDS
T05605
Symbol
bap1
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase BAP1 isoform X1
KO
K08588
ubiquitin carboxyl-terminal hydrolase BAP1 [EC:
3.4.19.12
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
112254919 (bap1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
otw01002
]
112254919 (bap1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112254919 (bap1)
03036 Chromosome and associated proteins [BR:
otw03036
]
112254919 (bap1)
Enzymes [BR:
otw01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
112254919 (bap1)
Peptidases and inhibitors [BR:
otw01002
]
Cysteine peptidases
Family C12: ubiquitin C-terminal hydrolase family
112254919 (bap1)
Ubiquitin system [BR:
otw04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UCH
112254919 (bap1)
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
112254919 (bap1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C12
UCH_C
Motif
Other DBs
NCBI-GeneID:
112254919
NCBI-ProteinID:
XP_042180618
LinkDB
All DBs
Position
LG07:complement(57587907..57605899)
Genome browser
AA seq
744 aa
AA seq
DB search
MNKGWLELESDPGLFTLLVEDFGVKGVQVEEIYDLQSKCPSPVYGFIFLFKWIEERRSRR
KVSTLVDETSVIDDDIVNDMFFAHQLIPNSCATHALLSVLLNCSGVELGTTLSRMKTFTK
GFGPESKGYAIGNAPELAKAHNSHARPEPRHLPEKQNGISAVRTMEAFHFVSYVPIKDRL
FELDGLKAYPIDHGPWGEEEEWTDKARRVIMERIGLATAGEPYHDIRFNLMAVVPDRRVK
YESKLEILKRNRQMVLEGLQQLIRVTQPELVQDRKKSDSSPSDDTPPTIKKEEADPQPVT
SQGAEQTPPTNTAAQSQLVPSSSGKGKAMGKPAAPLGGAGTSQPVTSPIVPRLPAFLDNH
NYAKSPMQEDEDLATGVGRPRVPGAPQPPYSDDDDYEDEEEEELGTPTRFRRKGVLRSRT
GRVGGGSGVETKLALGVLAEKLKKEVQRKDSLATPLSVRTEGRTGGIVITAASQPSPTPS
NESTDTASEIGSAFNSPLRSPARSQAATRPSSPVASHLSRVLFGEDEGLLRLDARQNRAV
RELGPSVSTALLHLQEDGVIYTVPPPADTALEEKKAGAPEKVKEQGSNPAVEGDRVKEEG
KEGPSVEVKEEEIRDAKEVKPSMEKVISTETVGSNKPSGEKYSPKELLALLKCVEADIAN
YEVFLKEEVEKRKKYKIDDQRRTHNYDEFICTFISMLAQEGMLASLVEQNISVRRRQGVS
IGRLHKQRKPDRRKRSRPYKAKRQ
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagggtggctggagctcgagagtgacccggggctgttcacgctcttggtggag
gattttggtgtgaagggggtccaggtagaggagatatacgacctacaaagcaagtgtcca
agccctgtttatggcttcatcttcctgttcaagtggatcgaggagcgaaggtctaggagg
aaagtctccactttggtggatgagacctctgtcattgatgatgacattgttaatgacatg
ttctttgcccaccagctgatcccaaactcctgtgccacccatgcacttctgagtgtgctc
ctgaactgtagtggggttgagttgggcactaccctcagtcgcatgaagactttcactaaa
ggcttcggcccagagagtaaaggctacgccattggaaatgccccagagctggctaaagca
cacaacagccatgccagaccggagcccaggcacctgccggagaagcagaacgggattagc
gccgtgcggaccatggaagcattccactttgtcagctatgtgcccatcaaagaccgcttg
tttgaactagacggcctcaaggcgtaccccattgaccacgggccatggggagaggaggag
gagtggacggataaggcacggcgggtcattatggagaggattggcttggccacggctgga
gagccctaccatgatatccgcttcaacctgatggcagtggttccggaccgcagggtgaag
tatgagtcaaaactggagatcctgaagaggaacagacagatggtactggagggtctacag
cagctgatccgggtcacccagccagagcttgtacaggacaggaagaagtcagactcctcc
ccctcagacgacacaccccctactatcaaaaaagaagaggcggaccctcaacctgttaca
tcacagggggctgagcagactcctcccacaaacacagcagcccagtcccaattggtcccg
agctcctcaggcaaggggaaagccatggggaagccagctgccccattagggggagcgggg
acctcccagcctgtcaccagccccatcgtccctcgcctaccagccttcttggacaaccac
aactacgccaagtcccccatgcaggaggatgaggaccttgcgacaggggtgggtcgtccc
agggtgcccggtgcgccccagcccccctactctgatgacgatgactatgaggatgaagag
gaggaagagcttggcacaccaaccaggttcaggcgtaaaggggtgctgcgttcccgtaca
ggccgtgtcgggggaggcagcggcgtagagaccaagctggcactcggcgtcctggccgag
aaacttaagaaggaagtccagaggaaggactctctggccacgcccctctccgtccgtacc
gagggccgcactgggggcatcgtgatcacagccgcctcccagccctcgcccacacccagc
aacgagagcaccgacaccgcctcggagatcggcagcgccttcaactcaccactgcgctcc
ccggcccgctcccaggcggccacgcggccctccagccctgtggcatcccacctgtcccgg
gtattgtttggggaggatgagggtctgctgaggctggatgccagacagaaccgggcagtc
agagagctggggccctccgtcagcaccgccctgctgcacctacaggaggacggggttata
tacactgtaccaccacccgctgatacagctcttgaagagaagaaggcaggcgctccagag
aaggtaaaagagcaaggtagcaatccagcagtagagggggacagagtgaaggaggagggg
aaggagggaccatcggtggaggtgaaagaggaagagatcagagatgcaaaagaggtcaaa
cccagcatggaaaaggtcatctccacagaaactgttggaagcaacaagccatctggggaa
aaatactctcctaaagagctgcttgctctgctcaagtgtgtggaggctgacatcgccaac
tatgaagtgtttctaaaggaggaggtggagaagaggaaaaaatacaagattgatgaccag
aggaggacccataattatgacgagttcatctgcaccttcatatccatgctggcacaagaa
ggcatgttggccagtctggttgagcagaatatctctgtgcgtcgtcgccagggagtgagc
atcggacgtttacacaaacagaggaaaccagaccgcaggaaacgctcgcgaccctacaag
gccaagcgccagtga
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integrated database retrieval system
