Oncorhynchus tshawytscha (Chinook salmon): 112258735
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Entry
112258735 CDS
T05605
Name
(RefSeq) RNA binding protein fox-1 homolog 2 isoform X1
KO
K14946
RNA binding protein fox-1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
otw03041
]
112258735
Spliceosome [BR:
otw03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
112258735
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
Motif
Other DBs
NCBI-GeneID:
112258735
NCBI-ProteinID:
XP_042183510
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All DBs
Position
LG09:79533963..79574764
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AA seq
474 aa
AA seq
DB search
MLMSTDVASIMLPVTRGMMDREKDIDTETGPHANTTGGPAAIVRGMKRGDPEQTAAALTE
LAGAECKRPRIDGTVGVGDIGQNNDPLTPGFLGYPPNSQGSQDSTGGQEGLVPPPFSVFP
PPPPPQNGLGTEFGGALFGAGGQGPSDSGAGTNGSATTSNILPTPQTEVSPGQVDGVGQC
VAVELAGVSGADSAEAKGTPKRLHVSNIPFRFRDPDLRQMFGQFGKIIDVEIIFNERGSK
GFGFVTFETSADAEKARERLHGTLVEGRKIEVNNATARVMTNKKMVSPYPNGEALSTLPY
AGWKLSPMVQAMYGPELYAVPGFPYPSAAAAASTAAAFRGAHLRGRGRPVYGAVRAAVPQ
PALPAYPGVVYQDGGFYGAADLYGGYPAAAYRFAQPTAVTGATAAAAAAAYSDSYGRVYT
TDPYHALGPAAAAYGVGAMVRAPQPQHYNNRLETELSSLYASLYRAGYSRFAPY
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgttaatgtcgaccgacgtcgcatccataatgttacccgttactcggggaatgatggac
agagaaaaggacattgatacagaaaccggaccccacgcgaacacgaccgggggtccagca
gcaatagtccggggaatgaaacgaggggatcctgagcaaacagctgcagcgttgaccgaa
ttagcaggagcagagtgcaaacggccaaggatagacgggacggtgggtgttggtgacatt
ggacagaacaacgaccctttaaccccaggtttccttggatacccacctaacagccagggt
tctcaagattcaacagggggccaggaggggctggtgcccccgcccttctcagtgttccct
ccaccaccccctccgcagaatggcctggggacagagtttggtggtgctttgtttggtgct
ggtgggcaggggccttcggattcaggggctggaacaaatggctcagccaccacttctaac
atcttacccaccccgcagacagaagtgtccccaggtcaggtagatggagtggggcagtgc
gtggcagtagaattagcaggagtatccggggctgactccgcagaggccaaaggaacccca
aaacgacttcatgtctccaacatccccttccgcttccgagaccctgacctcaggcagatg
tttgggcaatttgggaagattattgatgttgagataattttcaatgagaggggctcaaag
ggctttggctttgtcacgtttgagaccagcgccgacgcggagaaagcccgggaaaggctt
cacggcacgctagtggaaggtcgcaagatagaggttaacaatgccacggccagggtgatg
accaataagaagatggtcagcccctaccccaacggagaggcccttagcaccctgccatat
gcaggatggaagctaagcccaatggtacaggccatgtacggaccagagctctatgcagtt
ccggggttcccctacccgtctgcggcagcggcagcctccacggcagctgcgttccgtggt
gcccaccttaggggccggggaaggccagtgtacggtgctgtgcgtgcggcggtgccgcag
cctgccctccctgcctaccctggcgtggtgtatcaggatggtgggttttatggagctgca
gacttatacggaggctatcctgccgctgcctatcgctttgctcagcctactgctgtaacc
ggggcaactgctgccgcggcagccgctgcttacagtgacagttatgggcgagtgtacact
acagatccctaccacgctctaggtcctgctgcagctgcctatggagtcggtgccatggta
agagccccccagccgcaacactacaacaacaggctggaaactgagttatcttcactttat
gctagtttatatcgggctggatacagtaggtttgcgccgtactaa
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