Oncorhynchus tshawytscha (Chinook salmon): 112259132
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Entry
112259132 CDS
T05605
Name
(RefSeq) nuclear envelope pore membrane protein POM 121
KO
K14316
nuclear pore complex protein Nup121
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112259132
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112259132
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
112259132
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POM121
Motif
Other DBs
NCBI-GeneID:
112259132
NCBI-ProteinID:
XP_042183786
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All DBs
Position
LG09:complement(39671064..39684643)
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AA seq
1215 aa
AA seq
DB search
MSSREKRLIALISLVVCATAIFCLVLYYIPTLLYIAFIIGVCCVACYYHSGESLYVRLGP
HPRRGLTIPPVLRRWLPGIANGVPTAGRVRSRTVKDDVRESVVFTGQRRSDSAICRKDAT
HSDSFILSPRDILMGSYIGKAKSPASVVGRPRAGASSGANTNAREQLTLRERLARPNQAV
ITPNRRLSFGGEPLGTMGRFTITPQRHYPLQQTGTSSVGVLPPTQWDGFRKKNILTPRNS
PAVHSPVTVKIARPDHNTTQSQLFDHLNSPGVLGSPGLGAPADPCSRETVLSMLKESRKR
VVEDDRSFTAGQKSKRRRHDSSGSAHLAFEPLLPNGAPSKLVLNSLKRGLNAMVEESTMK
RSRTSSISSVSCGMTPSGTLGSVRNSIRSSLSSSQGITQWKKASTRSLSPLSSPGSSRSQ
TPERASKKPREEDARSPSSVSLARSDKTLTDPAPTTGKLSPAPEVPVASASSDSAGSGKR
KRKIPLVSSRRGDQISLPPPPELGYTITVKDLDQEKKAALSQINTVLKEPEPEKPAPVVT
TSSKPPVSDNPRPTLLASHLTVSMPARVAAPIPVINLDPVPSNTVNTAPTSTAFPVTNTP
AANPLLESLKMMRNNPLTSAAADNPTAVTTPAPLVPAEQKSKTSLTAPQATLPSLSQPAL
PSLSQPALPSLSQPALPSLSQPALPSLSQPALPALPSLSQPALPSLSQPAPPSLSQPAPP
SLSQPAPPSRSQSASTMPSTFTQALSQVTKAPSSVPILGGASLFGMANPLTALSTSLGPT
TTATTETTSSNPLLASVFKPIFGATALAPEGTPALPTFKPIFGSATATSAFGQPASTSAP
SNASASAIVFSRLTNSSTVAPAASLFTGLSNSTNPATPASVKSLFGNWSALPATTAATTT
ATGSTFQFGTASTTAPGPTLSSTAATTTSNSGFSFGAVTTTSAATQPTPSATTQGGFTFG
QPVATQSSTTASFGGFGMATAAEATAPAPTNQSTFTFGKSSFEAPAASVFPGAIQAPAAT
AAANPFTFGSPATGATPAPFAFGAAATTATSTFGTTTKLAFGANSTGFAFGNTTGTPAAP
AFGSATQTVGILPASAPTFSFGGVSTQQAPATPAQPATGGFNFGAAISGTQFGTSNPTTQ
TPGFNFGTSTPAFGQSTAAGPVPFGSPGTPVQGFSAMGSSSFGSPAAPSFSIGAGSKTSG
ARQRLQARRQHPRKK
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcaagagagaagcggttaatagcgcttatctctctcgtggtctgtgctaccgca
atattctgtctagttctctattatattccaacattgctttacatagctttcattattgga
gtttgttgcgttgcctgttattatcacagcggagaatctctttacgttaggttaggccct
catccacgccgtggtctgacaattccacccgtgctgcgacgctggttgccagggattgca
aacggagtacccacagcgggaagagttagaagtcgcaccgtcaaggatgatgttagggaa
tcagtagtatttactggccaacgacgttccgatagcgctatttgtcggaaagacgcgaca
cacagtgactcatttattctcagtcctcgggatatactcatgggaagttacattgggaag
gcaaaaagtcctgcctcagttgtggggaggccgcgagcgggtgcaagttcgggtgctaac
accaacgcacgagaacagttaactttacgcgaaagattggcgcgacccaaccaggctgtc
attactccaaacagacgactgtcattcgggggcgagccccttggcactatgggcaggttc
accatcactccccagcgccactaccccctccagcagacgggcacctcctctgtgggcgtc
ctgcccccgacccagtgggacggcttcagaaagaagaatattctcacccctcgcaactct
ccggcagtccacagtccagtcacagtgaagatcgctaggccagatcacaacaccactcaa
tcccagttatttgatcatttgaactccccgggagtccttggctctccaggcctgggggcc
cctgcagacccctgctccagggagactgttctgagcatgctcaaagagagtcgcaaaaga
gtggtggaagatgacaggagcttcactgcagggcaaaagagcaaaaggaggcgccatgac
agcagtgggagtgctcacttggcatttgagccactactgcccaatggagctccatctaag
ctggtgctgaattctctgaagcgagggctgaatgctatggtggaggagtcaacaatgaag
aggtcacgcacctcctccatcagctctgtgagctgtggcatgacccccagcggcaccctg
ggctcggtccgcaactccatccgtagctccctcagctcctcacaaggcattactcagtgg
aaaaaagcctccacccgcagtctctccccgctctccagccctgggtcgtcccggtcccag
accccagagagagcctctaaaaagcccagggaagaggacgctcgctcacccagctccgtg
tccttggcgaggtctgacaagacattgacagacccagcaccaaccactgggaagctgtct
ccagcccctgaagtccctgtggcttcagcctcatcagactctgccggtagtgggaaacgg
aaacgtaagattccgctggtgtccagccgtagaggagaccaaatctctttgcctccacct
cctgagttgggctacaccatcacggtgaaagacctggatcaggagaagaaagccgctctc
agccagatcaacacagtcctcaaagagcctgagccagagaagcctgctccggtagtgacc
acatcttctaagcctcccgtgtcagacaaccccagacccaccctgctggccagccatctt
accgtatcaatgcctgctcgtgtggcggctcctatccctgtcatcaacctagaccccgtc
ccctcaaacaccgtcaacacggccccaacctccacagccttccctgtcaccaacacccct
gcagccaaccccctcctggagtctctgaaaatgatgaggaacaaccccctcaccagtgct
gctgctgacaatcctacagcagtgacgacccctgcaccactggtgcctgcagagcagaag
tcgaagaccagcttgactgctcctcaggccacactaccctccctctcccagcctgcacta
ccctccctctcccagcctgcactaccctccctctcccagcctgcactaccctccctctcc
cagcctgcactaccctccctctcccagcctgcactacctgcactaccctccctctcccag
cctgcactaccctccctctcccagcctgcaccaccctccctctcccagcctgcaccaccc
tccctctcccagcctgcaccaccctcccgctcccagtctgccagcaccatgccctctacc
ttcacccaggcgctgagccaagtcaccaaggcccccagcagtgtccccatcctgggtgga
gcgagcctgtttggaatggccaatccactgactgccctgtccacatcactgggccccacc
acaaccgccaccacagaaacaaccagtagtaatcccctcctggcctctgtgttcaagccc
atcttcggggccacggccttagccccagagggcacacctgctcttcccacctttaaaccc
atatttggaagtgccacagccaccagtgctttcggacagccagcttccacctcagccccc
tccaatgccagtgcgtctgccatagtgttcagcaggctaaccaacagcagtacagtggcc
ccagccgcctccctgttcactgggctgtctaatagcaccaacccagccaccccggcatct
gttaagtctctgtttggaaactggagtgcgctgcctgcaacgactgctgccacaaccact
gccacaggaagtaccttccagttcggcaccgcctccaccacggctcctggacccactctc
agctccactgcagccaccaccactagcaacagcggcttttcgtttggtgcggtgaccacc
acctctgccgccactcaacccaccccctcagctaccacccaggggggattcacttttggc
cagcctgtagccacccagagctctaccactgcatccttcggtggctttggcatggccact
gcagccgaagccactgctcctgcacctacaaaccagtctactttcacatttgggaagtcg
tcgttcgaagctccggcggcatcggtgttccccggtgcgattcaggccccggctgctact
gcggcagctaatcctttcacatttgggtcacctgccactggggccacccctgcccctttt
gcttttggtgctgctgccactacggcgacctctacctttgggaccaccactaagctggca
tttggagccaactccaccggttttgcatttggcaacaccacgggcaccccagcagcccct
gcctttggctctgccacccagactgtcggcatactcccagcctccgccccaactttctcg
tttggtggtgtgtccacacagcaggcccctgctacccctgcccagcctgccaccggagga
ttcaacttcggcgcagccatttcaggcactcagtttggaacctctaaccccacaacacag
acaccaggcttcaactttgggacgtctacccctgcttttggccagagcacagctgcaggt
cctgtcccctttggaagcccaggaactccagtccaaggattcagtgctatgggatcctca
tcattcggctctccagcagctccttcgttctccattggcgctggctccaaaacatcaggg
gcgcgccagaggctacaggcccgaaggcagcaccccaggaagaagtag
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