Oncorhynchus tshawytscha (Chinook salmon): 112262108
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Entry
112262108 CDS
T05605
Name
(RefSeq) echinoderm microtubule-associated protein-like 1 isoform X1
KO
K18595
echinoderm microtubule-associated protein-like 1/2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
112262108
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
EMAP
112262108
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Gene cluster
GFIT
Motif
Pfam:
WD40
HELP
ANAPC4_WD40
RMC1_N
PKcGMP_CC
Menin
Motif
Other DBs
NCBI-GeneID:
112262108
NCBI-ProteinID:
XP_042186136
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Position
LG11:complement(47978966..48060507)
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AA seq
842 aa
AA seq
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MEDGFSSYSSLYDTSSLLQFCNDDSASAASSMEVTDRIASLEQRVQMQEDEIQLLKSALA
DVVRRLSISEEQNTMTNRRGPTKAVNPAVMKRSPSSESNVGKPARPMMAALPLRPMVNNG
TVLPKKSGGTLPSLSSSRKDAAATATKSTVRRTNSNETMSTLTRKDSGDSKSNRTRAGST
GSNSNGKRASESKLKEPVFNTGMRRVTHCKEEGYVKMYLKGRPITMYMAKDLVETYCLEA
KSDLPNKKLKLDWVYGYRGRDCRSNLYLLPTGETVYFIASVVVLYNVDEQLQRHYTGHTD
DIKCLAVHPDKITIATGQVAGTSSDGKQLAPHVRVWDSVSLNTLHVLGTGFFDRALVCLA
FSKSNGGNTLCVVDDSNDHVLSVWDWQREERLADVKCSNEGVFAADFHPTDTNIIVTCGK
SHLYFWTLERGTLVKKQGLFEKQEKPKFVLSVTFSENGDTITGDSSGNILVWGKGTNRIS
HAIQGAHDGSIFALCMLRSGTLVSGGKDRKLISWDGSYQQIQSVEVPELFGPVRTVAEGK
GESVLIGTTRNYVLQGSLYGEFTPITQGHTDELWGLAVHPWKPHFLTCGHDKHVSLWDSS
SHQPVWTKTMEDAAQSAGFHPSGAVVAIGTQTGRWLVLDTDSKDLVTVHTDGNEQLSVIR
FAPDGNFLAIGSHDNYIYIYVVGESGRKYSRLGKCSGHSSFITHLDWSVDSQYLVSNSGD
YEILYWIPSVCKQVVSVETTRDIPWATSTCTLGFQVFGLWPDGSDGTDINAVSRSNEKQL
LVTGDDFGKVCLFSYPCCQFRAPSHVYGGHSSHVTNVNFLFDDSCLVSTGGKDMSVMQWR
IV
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgggttctccagctacagcagcctctatgacacctcttcgttgctgcagttc
tgtaatgatgacagtgcgtcggcagccagcagcatggaggtgacggaccgcatcgcctcc
ctggagcagcgcgtccagatgcaggaagatgagatccagctgctcaagtcagcgctggcc
gacgtggtgcgccgcctcagcatctctgaggagcaaaacaccatgaccaataggaggggg
cccaccaaagctgtaaacccagctgtgatgaaaagatccccctcatcagaaagcaatgtt
ggaaagccagccagacccatgatggctgccctccctctaaggcccatggtcaacaacggt
actgtcctaccaaagaaaagtggcggcacgctaccatccctctccagctccaggaaggat
gctgctgcaacagcaaccaagagcactgtgaggagaaccaactccaacgaaacgatgagc
acgctgacgcgcaaagacagcggagactccaagagcaaccgcacccgcgccggctccacc
gggagcaactccaacggaaagagagccagcgaaagcaaactgaaggagcccgttttcaat
acagggatgcgacgagtgacacactgcaaagaggaaggatatgtgaaaatgtatttgaag
ggacggcccatcaccatgtacatggctaaagaccttgttgagacctactgcctggaagcc
aaatcggacctgccaaacaagaagctcaagctggactgggtttatgggtacagggggcgt
gactgtcgctctaacctgtacctgctacccacgggagagacggtgtacttcattgcttct
gtggtggttctctacaacgtggacgagcagctccagaggcactacaccggccacacggac
gacatcaagtgcctggctgtccatcctgataaaatcaccatagcaacgggacaggtggca
ggcacctcttccgatggcaaacagttggctcctcatgtgcgggtttgggactcagtgagt
ctcaacaccctccacgttctgggaacaggcttctttgaccgtgccctggtttgcctcgcc
ttctcaaaatcgaacggaggcaacacactgtgtgtagtagatgactccaacgaccatgta
ctctccgtgtgggactggcagagagaggagagactggctgacgtcaagtgttccaacgag
ggagtgttcgctgccgacttccaccccaccgacaccaacatcatagtcacgtgtgggaag
tcccacctctacttctggactctggaaaggggcacccttgtcaagaagcaaggcttgttt
gagaaacaagagaagcccaagttcgtcttgagtgtgactttttcagaaaatggagacacc
ataactggagactcaagtggaaatatactggtgtgggggaaaggcactaatcgaattagc
cacgccattcagggcgcacacgatgggagcatctttgcgctgtgtatgttgaggagtggc
acactggtgtcagggggaaaagatcggaaactcatctcttgggatgggagctaccagcag
atacaatcggttgaggttcctgaattatttggtcctgtccggactgttgctgagggcaaa
ggggagagtgtacttattgggaccaccaggaactatgttctacaaggcagtttatatggc
gaatttacccccatcactcaaggtcacacagatgagctgtgggggttggccgtgcacccc
tggaagccccacttcctcacctgtggtcacgacaagcacgtcagcctgtgggactcctcc
tcacatcagcctgtctggaccaagactatggaggacgcggcccagtctgctggattccat
ccctctggagcagtggttgctataggaacgcagaccggcaggtggctggtgctggatacc
gactctaaggatctagtcacagtgcacacagatgggaatgaacagctgtctgttatccgc
tttgcaccggatggtaatttcctggcgatcggctctcacgataactacatctatatctac
gtagtgggggagagtggcaggaagtacagcagattgggaaagtgctcgggtcactccagc
ttcatcacccatctagactggtcagtggactctcagtacctggtgtccaactcaggagac
tatgagatactctattggatcccgtctgtgtgtaaacaggtggtgagtgtggagaccacg
cgggacatcccctgggccacctccacctgcaccctgggcttccaagtctttgggttatgg
cctgatggctctgacgggactgacatcaacgccgtctccagatctaatgagaagcagctg
cttgtcacaggagacgactttggaaaagtctgccttttctcatacccctgctgtcaattc
cgggctcccagtcatgtctatggcggacacagcagtcatgtgaccaatgtgaacttcctg
tttgacgacagttgcctggtttccaccgggggcaaggacatgagcgtcatgcagtggcga
atagtgtga
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