Oncorhynchus tshawytscha (Chinook salmon): 112263632
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Entry
112263632 CDS
T05605
Name
(RefSeq) ras-related protein Rab-40C
KO
K07928
Ras-related protein Rab-40
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112263632
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
otw04031
]
112263632
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul5 complex
Target recognizing subunit
112263632
GTP-binding proteins [BR:
otw04031
]
Small (monomeric) G-proteins
Rab Family
Rab40
112263632
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
SOCS_box
Arf
Motif
Other DBs
NCBI-GeneID:
112263632
NCBI-ProteinID:
XP_024295867
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All DBs
Position
LG02:70657490..70664441
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AA seq
296 aa
AA seq
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MRGMMATQGSPVKSYDYLLKFLLVGDSDVGKGEILDSLQDGSAESPYPYSSGIDYKTTTI
LLDGRRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNGWSFDGIDRWIREIDEHA
PGVPRILVGNRLHLAFKRQVPTEQARAYAEKNGMTFFEVSPLCNFNVIESFTELSRIVLM
RHGMEKFWRPNRVFSLQDLCCRSIVSCTPVHLIDKLPLPVAIKSHLKSFSMANGMNAVMM
HGRSYSVATNAAGGSGGVSGNNSSSSKGNSLKRSKSFKPPPSPPKSSSSKSNCNIT
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgggatgatggctacacagggcagccctgtcaagagttacgactacctcctgaag
ttcttgctggttggagacagtgatgtggggaaaggagagatcctagacagtctgcaggac
ggatcagcagagtctccctatccctacagcagtgggattgactacaagactaccacaatc
ctgttggatgggagaagagtcaagttagagttgtgggatacgtctggacagggtcgattc
tgcacaatcttccggtcatattcacgtggggcacagggaatcctgctagtttatgatatc
acaaatggctggtcgtttgatggcattgaccgctggatccgggagatcgatgagcatgcc
ccgggggtgccccgcatcctagttggcaaccggctccacctggcctttaagaggcaggtg
cccacggagcaggcccgcgcctacgccgagaagaacggcatgaccttctttgaggtcagc
cctctgtgcaacttcaacgtcatcgagtcgttcacggagctgtcgcgcatcgtgctgatg
aggcacggcatggagaagttctggagaccaaaccgagtgttcagccttcaggacctgtgt
tgccgctccatcgtctcatgcacccccgtccacctcattgacaagctgcctctccccgtg
gccatcaagtcccacctcaagtccttctccatggccaacggaatgaatgctgtcatgatg
catggacgctcctactccgtggccaccaatgcggcgggcggcagcggcggcgtgagcggc
aacaacagcagcagcagcaagggaaacagtcttaaacgctccaagtcctttaaaccgcct
ccgagcccccccaagagtagcagcagcaaaagtaactgtaacatcacctag
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