Oncorhynchus tshawytscha (Chinook salmon): 112263683
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Entry
112263683 CDS
T05605
Symbol
usp47
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47 isoform X1
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
otw01002
]
112263683 (usp47)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112263683 (usp47)
Enzymes [BR:
otw01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
112263683 (usp47)
Peptidases and inhibitors [BR:
otw01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
112263683 (usp47)
Ubiquitin system [BR:
otw04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
112263683 (usp47)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
Ubiquitin_2
Motif
Other DBs
NCBI-GeneID:
112263683
NCBI-ProteinID:
XP_024295965
LinkDB
All DBs
Position
LG12:complement(65267388..65290137)
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AA seq
1388 aa
AA seq
DB search
MEMVPSEENQLVPKEAMFWSCRQSIFDEMKKRFSQIENAAEEPRVLCIVQDTTSAKTVNE
RLTLNLPASTTLPKLFEDVAHKAGYVNGTFDLAWRKTGDMGSLDPSSEMSLTEFGFEPGK
RNFLQLTDKDGEQPQIASDESGTAGSSGLDDSSQERFIGPLPRDCTVGCSSDYSSPSYSY
SSILNKSDTGYVGLVNQAMTCYLNSLLQTLFMTPEFRNALYNWEFEESEEDPVTSIPYQL
QRLFLLLQTSKKRAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQQQF
SPLTADLINQLYQGKLKDYVRCLECGYESWRIDTYLDIPLVIRPFGASQAYGSVEEALQA
FVQPETLDGANQYFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRM
SFPEELDMSPFIDVEDEKSPQTESCTDSGAENEGSCHSDQMSNDFSADDGVDEGICLDSA
SSTERVLKPKSSLTFELFSVMVHSGSAAGGHYYACIKSFSDGQWYSFNDQHVSKITQEDI
RKTYGGSSGSRGYYSSAFASSTNAYMLIYRLKDPSRNAKYLDCDDFPEHIKHLVQREKES
EEQEKRQREIERNTCKIKLFCMHPVKMMAMMENKLEVHKDKTLREATEMAYKLMELDGVV
PLDCCRLVKYDEFHEYLERSYEGEEDTPMGLLLGGVKSSYMFDLLLETRRPEQVFQPYKP
GEVMVKVHVVDLKTDTVAPPVSIRAYLNQSITEFKQLIAQATELSAETMRVVLERCYNDL
RLLYVPNKTLKAEGFFRSNKVFVESSESPDHQVTFTDSLLWKLLDRHGNTIRLFVSLPVQ
SPGTNRTICQKVGGDPEECSEGSKGNRNSVETILEESTEKLKNLSLQPQQGTSDSQKSSD
TSDFEQIESPSPSQEPDSSSVSAVVAVDTRELEIRVASGGGAYSDPETQFPGEERSDSEV
NNDRSTSSVDSDILSSSHSSDTLCNADSGPIQLANGLDSHSITSSRRSKANEGKKETWDT
AEEDSGTDSEYDENGKSKAESYYLYFRAEPYAQEDGSGEGGQKCVLVHVDKRITLSAFKQ
NLEPFVGVTSTQFKVFRVYANNQEFESVRLNETLSSFSDDNKITIRLGRALKKGEYRVKV
YQLLVNDAEPCKFLVDTVFAKGMTVKQSKEELMPQLKDQCKLDLNIDKFRLRKKTWKNPG
TVFLDYHVYEEDINISSNWEVFLEVLDGPEKMKSMSQLAVLTRRWTPAQMKLEPFQEVVL
ESSSVEELKEKLSEISGVPLENLEFAKGRGTFPCDISVLEIHQDLDWNPKVSTLNVWPLY
ICDDGAVVFYRDSTEEPMEQSEDERNELMKKESSRLLKTGHRVSYSPRKEKALKIYLDGG
PVKDPGQD
NT seq
4167 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggtgcccagcgaagagaaccagctcgtaccgaaagaggctatgttttggagt
tgcaggcagagtattttcgatgagatgaagaagaggttttctcagatagagaatgcggcg
gaggagcccagagtgctgtgcatagtccaggacactaccagtgctaagacagtcaacgag
aggctcaccctcaacttgccagcctccaccacccttcccaaactcttcgaggatgtggcc
cacaaggcgggctatgtgaacggcacctttgacctggcatggcgcaagacaggggacatg
ggttcgctggatcccagcagtgagatgtccctcactgagttcgggtttgagcccgggaag
aggaacttcctccaactcacagacaaggacggagaacagcctcagattgcatcggatgag
tcggggacagcgggcagcagcggtctggatgacagctcccaggagcgcttcatcggccct
ctacccagagactgcacggtgggctgcagcagtgactacagcagccccagctactcctac
tcctccatcctcaacaagtctgacacaggatatgtgggtttggttaatcaggccatgacc
tgctatttgaacagccttctacaaacactgtttatgaccccggagttcagaaatgcactg
tacaactgggagtttgaggagtcggaggaagacccggttaccagcatcccttaccagcta
cagaggctgtttttgctgctgcagaccagtaagaagagggccatcgagaccaccgacgtg
acccgcagcttcggctgggacagcagcgaagcctggcagcagcatgacgtccaggagctg
tgtagggtcatgtttgatgccttggagcagaaatggaagcagacagagcagcagcagttt
tctccacttacggctgacctgattaaccagctgtaccaggggaagctgaaggactatgtg
cgctgtctggagtgtggctatgagagctggaggatcgacacctacctggacatccctctg
gtcatcagaccatttggggccagccaggcttatggcagtgtggaggaggctctgcaggcc
ttcgtccagccagagactctggacggggccaaccagtacttctgtgagcgctgcaagaaa
aaatgtgatgcccgaaaggggctgagatttctgcactttccctacctgctgactctgcag
ctgaagcgttttgactttgactacaccactatgcaccgcatcaaactcaacgaccgcatg
tccttccctgaggagctggacatgagtcccttcatcgacgtggaggacgagaaatctcct
caaacggagagctgcactgacagcggggcagagaatgaaggcagttgccacagcgaccag
atgagcaacgacttctcggcggacgacggtgtggatgagggcatctgcctggacagcgcc
agcagtactgagagggtcctgaagccaaagagttcattgacctttgagctgttctcggtc
atggtgcattcgggcagcgctgcaggtggccactactatgcctgcattaagtccttcagc
gatggccagtggtacagtttcaacgaccagcacgtcagcaagatcacccaggaagacatc
aggaaaacgtatggagggtcctctgggagcagaggctattactccagtgcctttgccagc
tctacgaatgcatatatgctgatttataggttgaaagacccctcaaggaatgcaaagtat
ctggattgtgatgacttccctgagcacataaagcatctggtccagagggagaaggagtct
gaggagcaggagaaaagacagagggagattgagcgcaatacctgcaagatcaagctgttc
tgcatgcatccggtgaagatgatggctatgatggagaacaagctggaagtgcacaaggac
aagacgctcagagaggcaacagagatggcctacaagctcatggaactggatggggtggtc
ccgctggactgctgtcgcctggtcaagtacgatgagttccatgagtacctggagcgctcg
tacgagggtgaggaggacacccccatggggctgctgctgggcggggtcaagtcctcctac
atgtttgacctgctgctggagacgcgcagaccagagcaagtcttccagccatacaaaccc
ggagaggtgatggtgaaggttcacgtggtggatctgaagactgacactgttgcccctccc
gtcagcatcagggcctacctaaaccagtcaatcactgagttcaagcagctcattgcacag
gccacagagctctcagctgaaaccatgcgtgtggtcctggagcgctgctataatgacctt
cggcttctctacgtgcccaacaagacattgaaagcagagggtttcttcaggagcaacaag
gtttttgtggaaagctctgaatccccagatcaccaggtcactttcactgattccctcttg
tggaaactgctggatcgccatgggaacacaatccgcctgtttgtctcgctccctgtgcaa
tcccccggcaccaacagaactatttgccaaaaagtgggcggcgatcctgaggagtgctct
gaggggtcaaagggcaacaggaattctgtagagaccatcttggaggagagcacagagaag
ctgaagaacctgtccctccagccgcagcagggcaccagtgacagccagaagagctcagac
accagcgacttcgaacagatcgagtccccctcaccttctcaggaaccagactcctcctcc
gtatctgctgtcgttgcagtcgacacccgagagctggagatccgggtggccagcggcggg
ggggcctactccgacccggaaacccagttccctggggaggagcgctcggactctgaggtg
aacaacgatcgcagcacgagctcagtggacagtgacatcctgagctccagccacagcagt
gacacgctgtgcaacgccgacagcggccccatccagctggccaatggcctggactcacac
agcatcaccagcagccgccgctccaaggccaatgagggcaagaaggagacgtgggacaca
gccgaggaggacagtggcacggacagcgagtatgatgagaacgggaagagcaaggcggaa
tcctattacctctacttcagagcagaaccatatgcacaggaggacggctctggggaagga
ggccagaaatgtgtactggtccacgtggataagaggataactctgtcagcgttcaaacag
aacctggagcctttcgtgggggtcacctctacccagttcaaggtgttccgcgtctacgcc
aacaaccaggagtttgagagtgtacggctcaacgagaccctctcctccttctctgacgac
aacaagataaccattcgattaggcagagcactgaagaagggcgagtatcgggtgaaagtg
taccagctactagtgaatgatgcagagccctgtaagttcctcgtagacacagtgtttgct
aagggcatgactgtgaaacagtccaaagaggagctaatgcctcagctgaaagaccaatgc
aagctggacctcaacatcgacaagttccgtctcaggaagaagacgtggaagaacccaggg
acagtgtttctggactaccacgtctacgaggaggacatcaacatctccagtaactgggag
gtttttttggaggttctagatggaccggagaagatgaagtccatgtcccagctggctgtg
ctgacccgccgctggacccccgcccagatgaagctggagcccttccaggaagtggttctg
gagagcagcagtgtggaggaactcaaggaaaagctcagtgaaataagtggtgttcctctt
gaaaacctggagtttgccaaggggcgaggaacatttccttgtgatatctcggtattggag
atccatcaggatctggactggaaccctaaagtgtccactctgaatgtgtggcctctgtac
atctgtgatgatggcgctgtggtcttctacagggacagcacagaggagcctatggaacag
tctgaagacgaacgcaatgagctgatgaagaaggagagcagccggctgctgaagactggc
caccgggtcagttactcacctcgtaaggagaaggcccttaagatctacctggatgggggc
ccggtcaaggacccggggcaggactga
DBGET
integrated database retrieval system
