Oncorhynchus tshawytscha (Chinook salmon): 112263829
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Entry
112263829 CDS
T05605
Name
(RefSeq) tripartite motif-containing protein 66
KO
K12032
tripartite motif-containing protein 66
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112263829
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
112263829
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
PHD
Pertussis_S1
DUF1281
Motif
Other DBs
NCBI-GeneID:
112263829
NCBI-ProteinID:
XP_042175016
LinkDB
All DBs
Position
Unknown
AA seq
1392 aa
AA seq
DB search
MVCYVSMCGSRGTCPFLVLIQGFLQTDEPGEERRGEESSARRLSSRAALLGTSSTVHQRT
HYPTADMEKRCSECPEPRLAQSLCTFCNKWLCYQCTDMHQHQRATPQCSDLHQHQKPTTQ
CVDLHQRDQMAPSSLPPPEPGPGSCGRPILMCHSHRQEPLELFCESCDLMCCSSCHLSAH
KNHRLVHIGKALQDQQWQFESLMAQVEERRSAVESTAKQIEDRLHGVKITQRKAENQIKM
AKMIMMNELNKRANLLIEQLEKISEDFQRRLEDQLQGEIEMCSQLDHVQNFISWATAHHL
KNPLLFSRELISLQMQRLLEPPLHSDAWLPVKIKFNWDASYWTKQISTLGQLTAEGGNRS
YSEGVAFPSILRPQPITCLSLPSMCHGGRDQGCAFQACCQPQMCCLHCIPPQPAVQLDKT
QREPNPYSARCAQSTLSSPSLALHQSQLLRCWGPDSPPGPPGVVPSSMQRPQQPAHLPAA
DPGLLSSSSNSGGLGLQPPATALYQPQIQPLPDTHAQPATDGAWEGQGQQASREREQTPG
QPAVDREVLTEQIQEGSREKTHVQTGVDREVLTDGIQQEQQQQQQQQQQLLSPLVAELTV
EQQEGEQQEARTTQPSRDCRDGRRSTSLEMSVTTHGFSVDAQSSRPSSLCGRKSRSQSIP
PELAGPSSSPSTDRPLGATHSLATATAAVERGRMADQQGFMDLRRRRLSSDGVIRSVASL
ERSLATPPSRGQPNLHLSPLTIYKTEPDYVYAYDETGHDVKGKCRIQRKTPDNSDREVQK
EPGSSSSKVPVVCLERLKILVSRIPPQGRRQSDPLSDTATERTGPVPQRGWKDKMTEGIS
KEAKVATDSPSLDKQYSERHTINQSLPPLVINDWPEHGRHSPHKELTLQVPATDLVSPPP
FSAPDLDSDSDPRSISEIVSDPELDTDPQPESDPQQESDPQPESDPQAESASEAGLESVA
DEESPDEAATESEPSVESEPSVESEPRVESEPSVESEPRVESEGSEESENGLESENGEDL
DADAESEADMESDLQPDPGSDPRFPSETRPRLDSDLESDCAQPPESQGSAESGPDLESEP
DSATDPASITPDPASLSPEPGVESPPAQKSLHADPGPQMHCEGAEQALPGAETMEMQIHC
EGAEQALPGAETMEMESEDFCAVCLIGGDLLCCDRCPKVFHLSCHVPALLSFPTGDWVCT
FCRDILQPEVEYDCENQRLAAECSGKPLPHGLSACDQRKCERLTLLICSNMLSAPFHEPV
SPLARHYYQIIKRPMDLSVIRAKLSKRSTHHYYSPEEFVADVSLMFRNCAKFNYPDSEVA
QAGRSLEMFFSSRLREVFPDRAFPAAEDDSDSDEYDEVYRAAEGGFPWPEKREQCHRKRK
RRHSLSWRKHNF
NT seq
4179 nt
NT seq
+upstream
nt +downstream
nt
atggtgtgctacgtgagcatgtgtggctccagagggacctgtcccttccttgtgctgata
cagggattcctacagacagatgaaccaggcgaggagaggagaggagaggagagctcagca
cgcaggctgtcatcgagagcagctctgctgggtaccagctctaccgttcaccagaggaca
cattaccccactgctgacatggagaagcgttgctcagagtgcccagagcccaggctagcc
cagagcttgtgtacattctgcaacaagtggctgtgctaccagtgcacagacatgcatcag
caccagagagccacccctcagtgctcagacctgcaccaacaccagaagcccactacccaa
tgtgtcgacctgcaccagagggaccagatggcccccagctccctgcctccacccgaacca
ggccctggctcgtgtggccgccccatcctcatgtgccactctcacagacaagagcccttg
gagctcttctgcgagtcctgtgacctcatgtgctgcagcagctgtcacctgtccgcccac
aagaaccacaggctggtgcacattggaaaggccctgcaggaccaacagtggcagtttgag
agcctgatggctcaggtggaggagaggaggtctgcagtggagagcacagccaaacagata
gaggacaggctgcacggtgtaaagatcacgcagaggaaggctgagaaccagattaaaatg
gcaaagatgattatgatgaatgagctgaacaaacgggccaacctattaatagagcaactg
gagaagatctcggaggacttccagcggcgtctggaggaccagctgcagggggagatagag
atgtgcagccagctggaccacgtgcagaacttcatcagctgggcaacggcccaccacctc
aagaacccacttctcttcagcagggagctgatttctctccagatgcagcgcctgcttgaa
cccccactacactcagacgcctggctccctgtgaagatcaagttcaactgggatgccagc
tactggactaagcagatctcaactttgggtcagctcactgcagaggggggaaatcgctcc
tactctgagggcgtggccttccccagcatcctgaggccccagcctatcacctgcttgtcc
ctgccatctatgtgccatggagggcgggaccagggctgtgccttccaggcctgctgtcag
ccccagatgtgctgcctccactgcatacccccacagccagctgtgcagctggacaagacc
cagcgggaacccaacccctactccgccaggtgtgctcagtccaccctcagctctccctcc
ctggccctgcaccagagtcagctgctgaggtgctggggccctgacagtcctccaggtcca
ccaggtgtggtgccctcctccatgcagcgtccccaacagccagcgcatctcccggctgct
gacccaggcttgctcagctccagctccaacagtggaggtcttggactccagcccccagcc
acagccctctaccagcctcagattcagccacttcccgacactcatgcacagccagccaca
gatggggcctgggaaggccagggccagcaggccagcagagagagagagcagactcctggg
cagccagctgtggacagagaggtgttgacagagcagatccaggaggggagcagggagaag
acacatgtacagacaggggtggacagagaggtgctgacagatgggatccagcaggagcag
cagcagcagcaacagcagcagcagcagctcctgtctcccctagtggccgaactgacagtg
gagcagcaggagggagagcagcaggaggccaggactacacagccatccagggactgcaga
gatggcaggagatccacttcactggagatgtctgtgacgacccatgggttcagtgttgat
gctcagagcagcaggcccagctcactgtgtgggaggaagagtcgatcccagagcatccca
ccagaactggcaggcccctccagcagcccttccacagacaggcccctgggggccacccac
agcttagcaacagcaacagcagccgtggaacggggacgcatggcagaccagcagggtttt
atggatctcaggcggaggaggctgtcttctgatggagtgatacgatctgtggcctccctg
gagagatccttagccactcctccctccagaggccagcccaacctacacctgtcacctttg
accatttacaagacagagcctgattatgtttatgcatatgatgagactgggcatgacgtc
aaaggaaaatgcagaatacaaagaaagactccagacaacagtgacagagaggttcagaag
gaacctgggagttccagttccaaggttccagtggtgtgtttggaaaggctgaagatcctg
gtgtctcggatcccaccacaggggcggcgacagagtgaccctctgtcagacactgcaaca
gaaaggaccggacctgttccacagaggggatggaaggacaagatgactgagggaatatca
aaagaagccaaggtcgcaacggacagcccgtctctggataaacaatactcagagagacac
actatcaatcaatctctcccacctctagtaatcaatgattggcctgagcatggaagacac
agtcctcacaaagagctcacactgcaagtacccgccactgatcttgtatcacctccacct
ttctctgcacctgaccttgactctgactcagatcccaggtcaatctcagaaatagtttct
gacccggaactggacacggacccacaaccagaatcggatccccagcaagagtctgaccca
caaccagaatctgacccacaagctgagtctgcatcggaggctggtctggaatcagttgct
gatgaggaatctcctgatgaggctgctacagaatctgaacctagtgtggaatcagaacct
agtgtggaatcagaacctagagtggaatcagaacctagtgtggaatcagaacctagagtg
gaatcagaaggtagtgaagaatcagagaatggtttagaatcagagaatggtgaagacctg
gatgctgatgcggaatcggaggctgatatggaatcagacctccaacctgaccctggctca
gacccccgttttccatctgaaacacgtccgagattagattcagacctggaatcagactgt
gcacaaccccctgaatcacaagggtctgcagaatctggaccagatcttgaatcggagcca
gactcagccactgacccagcctctatcactcctgacccagcctctctaagtcctgaacca
ggagtggagtcccctccagcccagaagtccctgcatgcagaccctggtccacagatgcat
tgtgaaggagctgagcaggccctgcctggggcagagaccatggagatgcagatccattgt
gaaggagctgagcaggccctgcctggggcagagaccatggagatggaaagtgaagacttc
tgtgccgtgtgtctgatcggaggagaccttctatgctgtgaccgctgtcccaaagtcttc
cacctgtcctgccatgtgcctgctctcctcagcttccccacgggtgactgggtgtgtacc
ttctgcagagatatcctgcagccagaggtggagtatgactgtgagaaccagaggctggct
gcagaatgttcaggaaagccactacctcatggtctctctgcttgtgaccagagaaaatgt
gagaggttgactctgttgatctgcagcaacatgctaagtgctcccttccatgagccggtc
agtccactggctcgccactactaccagataatcaaaaggcccatggatctgtctgtgatc
agggccaaactcagcaagaggagcactcaccactactattcacctgaggagtttgtggct
gatgtctccctcatgttcaggaactgtgcaaagttcaattatccggactcagaggtggcc
caggcaggtcgcagcctggagatgtttttcagctccagactcagggaggtgttcccagac
agggccttccctgcagccgaggatgactccgacagcgatgagtacgacgaggtgtacaga
gcagctgagggaggcttcccctggccagagaagagagagcagtgccacaggaagaggaag
aggaggcactctctcagctggaggaagcataacttctag
DBGET
integrated database retrieval system