KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112263829
Entry
112263829         CDS       T05605                                 
Name
(RefSeq) tripartite motif-containing protein 66
  KO
K12032  tripartite motif-containing protein 66
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:otw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:otw04121]
    112263829
Ubiquitin system [BR:otw04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    112263829
SSDB
Motif
Pfam: Bromodomain zf-B_box PHD Pertussis_S1 DUF1281
Other DBs
NCBI-GeneID: 112263829
NCBI-ProteinID: XP_042175016
LinkDB
Position
Unknown
AA seq 1392 aa
MVCYVSMCGSRGTCPFLVLIQGFLQTDEPGEERRGEESSARRLSSRAALLGTSSTVHQRT
HYPTADMEKRCSECPEPRLAQSLCTFCNKWLCYQCTDMHQHQRATPQCSDLHQHQKPTTQ
CVDLHQRDQMAPSSLPPPEPGPGSCGRPILMCHSHRQEPLELFCESCDLMCCSSCHLSAH
KNHRLVHIGKALQDQQWQFESLMAQVEERRSAVESTAKQIEDRLHGVKITQRKAENQIKM
AKMIMMNELNKRANLLIEQLEKISEDFQRRLEDQLQGEIEMCSQLDHVQNFISWATAHHL
KNPLLFSRELISLQMQRLLEPPLHSDAWLPVKIKFNWDASYWTKQISTLGQLTAEGGNRS
YSEGVAFPSILRPQPITCLSLPSMCHGGRDQGCAFQACCQPQMCCLHCIPPQPAVQLDKT
QREPNPYSARCAQSTLSSPSLALHQSQLLRCWGPDSPPGPPGVVPSSMQRPQQPAHLPAA
DPGLLSSSSNSGGLGLQPPATALYQPQIQPLPDTHAQPATDGAWEGQGQQASREREQTPG
QPAVDREVLTEQIQEGSREKTHVQTGVDREVLTDGIQQEQQQQQQQQQQLLSPLVAELTV
EQQEGEQQEARTTQPSRDCRDGRRSTSLEMSVTTHGFSVDAQSSRPSSLCGRKSRSQSIP
PELAGPSSSPSTDRPLGATHSLATATAAVERGRMADQQGFMDLRRRRLSSDGVIRSVASL
ERSLATPPSRGQPNLHLSPLTIYKTEPDYVYAYDETGHDVKGKCRIQRKTPDNSDREVQK
EPGSSSSKVPVVCLERLKILVSRIPPQGRRQSDPLSDTATERTGPVPQRGWKDKMTEGIS
KEAKVATDSPSLDKQYSERHTINQSLPPLVINDWPEHGRHSPHKELTLQVPATDLVSPPP
FSAPDLDSDSDPRSISEIVSDPELDTDPQPESDPQQESDPQPESDPQAESASEAGLESVA
DEESPDEAATESEPSVESEPSVESEPRVESEPSVESEPRVESEGSEESENGLESENGEDL
DADAESEADMESDLQPDPGSDPRFPSETRPRLDSDLESDCAQPPESQGSAESGPDLESEP
DSATDPASITPDPASLSPEPGVESPPAQKSLHADPGPQMHCEGAEQALPGAETMEMQIHC
EGAEQALPGAETMEMESEDFCAVCLIGGDLLCCDRCPKVFHLSCHVPALLSFPTGDWVCT
FCRDILQPEVEYDCENQRLAAECSGKPLPHGLSACDQRKCERLTLLICSNMLSAPFHEPV
SPLARHYYQIIKRPMDLSVIRAKLSKRSTHHYYSPEEFVADVSLMFRNCAKFNYPDSEVA
QAGRSLEMFFSSRLREVFPDRAFPAAEDDSDSDEYDEVYRAAEGGFPWPEKREQCHRKRK
RRHSLSWRKHNF
NT seq 4179 nt   +upstreamnt  +downstreamnt
atggtgtgctacgtgagcatgtgtggctccagagggacctgtcccttccttgtgctgata
cagggattcctacagacagatgaaccaggcgaggagaggagaggagaggagagctcagca
cgcaggctgtcatcgagagcagctctgctgggtaccagctctaccgttcaccagaggaca
cattaccccactgctgacatggagaagcgttgctcagagtgcccagagcccaggctagcc
cagagcttgtgtacattctgcaacaagtggctgtgctaccagtgcacagacatgcatcag
caccagagagccacccctcagtgctcagacctgcaccaacaccagaagcccactacccaa
tgtgtcgacctgcaccagagggaccagatggcccccagctccctgcctccacccgaacca
ggccctggctcgtgtggccgccccatcctcatgtgccactctcacagacaagagcccttg
gagctcttctgcgagtcctgtgacctcatgtgctgcagcagctgtcacctgtccgcccac
aagaaccacaggctggtgcacattggaaaggccctgcaggaccaacagtggcagtttgag
agcctgatggctcaggtggaggagaggaggtctgcagtggagagcacagccaaacagata
gaggacaggctgcacggtgtaaagatcacgcagaggaaggctgagaaccagattaaaatg
gcaaagatgattatgatgaatgagctgaacaaacgggccaacctattaatagagcaactg
gagaagatctcggaggacttccagcggcgtctggaggaccagctgcagggggagatagag
atgtgcagccagctggaccacgtgcagaacttcatcagctgggcaacggcccaccacctc
aagaacccacttctcttcagcagggagctgatttctctccagatgcagcgcctgcttgaa
cccccactacactcagacgcctggctccctgtgaagatcaagttcaactgggatgccagc
tactggactaagcagatctcaactttgggtcagctcactgcagaggggggaaatcgctcc
tactctgagggcgtggccttccccagcatcctgaggccccagcctatcacctgcttgtcc
ctgccatctatgtgccatggagggcgggaccagggctgtgccttccaggcctgctgtcag
ccccagatgtgctgcctccactgcatacccccacagccagctgtgcagctggacaagacc
cagcgggaacccaacccctactccgccaggtgtgctcagtccaccctcagctctccctcc
ctggccctgcaccagagtcagctgctgaggtgctggggccctgacagtcctccaggtcca
ccaggtgtggtgccctcctccatgcagcgtccccaacagccagcgcatctcccggctgct
gacccaggcttgctcagctccagctccaacagtggaggtcttggactccagcccccagcc
acagccctctaccagcctcagattcagccacttcccgacactcatgcacagccagccaca
gatggggcctgggaaggccagggccagcaggccagcagagagagagagcagactcctggg
cagccagctgtggacagagaggtgttgacagagcagatccaggaggggagcagggagaag
acacatgtacagacaggggtggacagagaggtgctgacagatgggatccagcaggagcag
cagcagcagcaacagcagcagcagcagctcctgtctcccctagtggccgaactgacagtg
gagcagcaggagggagagcagcaggaggccaggactacacagccatccagggactgcaga
gatggcaggagatccacttcactggagatgtctgtgacgacccatgggttcagtgttgat
gctcagagcagcaggcccagctcactgtgtgggaggaagagtcgatcccagagcatccca
ccagaactggcaggcccctccagcagcccttccacagacaggcccctgggggccacccac
agcttagcaacagcaacagcagccgtggaacggggacgcatggcagaccagcagggtttt
atggatctcaggcggaggaggctgtcttctgatggagtgatacgatctgtggcctccctg
gagagatccttagccactcctccctccagaggccagcccaacctacacctgtcacctttg
accatttacaagacagagcctgattatgtttatgcatatgatgagactgggcatgacgtc
aaaggaaaatgcagaatacaaagaaagactccagacaacagtgacagagaggttcagaag
gaacctgggagttccagttccaaggttccagtggtgtgtttggaaaggctgaagatcctg
gtgtctcggatcccaccacaggggcggcgacagagtgaccctctgtcagacactgcaaca
gaaaggaccggacctgttccacagaggggatggaaggacaagatgactgagggaatatca
aaagaagccaaggtcgcaacggacagcccgtctctggataaacaatactcagagagacac
actatcaatcaatctctcccacctctagtaatcaatgattggcctgagcatggaagacac
agtcctcacaaagagctcacactgcaagtacccgccactgatcttgtatcacctccacct
ttctctgcacctgaccttgactctgactcagatcccaggtcaatctcagaaatagtttct
gacccggaactggacacggacccacaaccagaatcggatccccagcaagagtctgaccca
caaccagaatctgacccacaagctgagtctgcatcggaggctggtctggaatcagttgct
gatgaggaatctcctgatgaggctgctacagaatctgaacctagtgtggaatcagaacct
agtgtggaatcagaacctagagtggaatcagaacctagtgtggaatcagaacctagagtg
gaatcagaaggtagtgaagaatcagagaatggtttagaatcagagaatggtgaagacctg
gatgctgatgcggaatcggaggctgatatggaatcagacctccaacctgaccctggctca
gacccccgttttccatctgaaacacgtccgagattagattcagacctggaatcagactgt
gcacaaccccctgaatcacaagggtctgcagaatctggaccagatcttgaatcggagcca
gactcagccactgacccagcctctatcactcctgacccagcctctctaagtcctgaacca
ggagtggagtcccctccagcccagaagtccctgcatgcagaccctggtccacagatgcat
tgtgaaggagctgagcaggccctgcctggggcagagaccatggagatgcagatccattgt
gaaggagctgagcaggccctgcctggggcagagaccatggagatggaaagtgaagacttc
tgtgccgtgtgtctgatcggaggagaccttctatgctgtgaccgctgtcccaaagtcttc
cacctgtcctgccatgtgcctgctctcctcagcttccccacgggtgactgggtgtgtacc
ttctgcagagatatcctgcagccagaggtggagtatgactgtgagaaccagaggctggct
gcagaatgttcaggaaagccactacctcatggtctctctgcttgtgaccagagaaaatgt
gagaggttgactctgttgatctgcagcaacatgctaagtgctcccttccatgagccggtc
agtccactggctcgccactactaccagataatcaaaaggcccatggatctgtctgtgatc
agggccaaactcagcaagaggagcactcaccactactattcacctgaggagtttgtggct
gatgtctccctcatgttcaggaactgtgcaaagttcaattatccggactcagaggtggcc
caggcaggtcgcagcctggagatgtttttcagctccagactcagggaggtgttcccagac
agggccttccctgcagccgaggatgactccgacagcgatgagtacgacgaggtgtacaga
gcagctgagggaggcttcccctggccagagaagagagagcagtgccacaggaagaggaag
aggaggcactctctcagctggaggaagcataacttctag

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