Oncorhynchus tshawytscha (Chinook salmon): 112264415
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Entry
112264415 CDS
T05605
Name
(RefSeq) homeobox protein Hox-A3a-like
KO
K09303
homeobox protein HoxA/B/D3
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112264415
Transcription factors [BR:
otw03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
112264415
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DUF4074
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
112264415
NCBI-ProteinID:
XP_024296774
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Position
LG13:18035489..18071441
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AA seq
422 aa
AA seq
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MQKATYYDSSAIYSGYPYQSANGFSYDANQVQYPRASHVESEYHRPACSLQSPDGLVALQ
KPGEMAENCDRGTAIQAAQPPVLTESNQPQMSVSVPPPPPQSQSPGALNQNTSNGSCQPN
SKSSVHSSPSTTRKHIFPWMKESRQNQKPKTSSSSSVESCPGDKSPPGGSAASKRARTAY
TSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKGCGMMPS
PGGQSPRSPLGPSPGGGGGGYLNSMHSLVNSVPYESQSPTSYNKPAHNAYGMPTSYPPPL
NSSLNNCPPSQKRYPGTGGSATPEYDAHPLQGNGGYGTHLQQVSPVYVGGGYIDSMPNNR
ASVFGLTHLSHPPSTNMDYNGAITMGNSHHQRVCDPNPTYTDLNTPHYSQGRIQEAPKLT
HL
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaggcaacctactacgacagctccgcaatttacagtggctacccgtatcaaagc
gcaaatggcttcagttatgatgccaatcaggtccaatatccccgggcctctcatgtggaa
agtgagtaccatcgaccagcctgctccttgcagtccccagacggcttggtcgccctgcag
aagccgggggagatggcggagaactgcgataggggtacggccatccaggcagcgcagcca
cccgtcctcactgaaagcaatcaaccgcagatgtcagtgtctgtcccaccaccccctccc
cagtcacagtcccccggtgctctcaaccagaacacgagcaacggctcctgtcaacccaac
tcaaagagctcggtgcacagctcgccgtccaccacccggaagcatatcttcccctggatg
aaagagtcccgtcagaaccagaagcctaaaaccagtagctccagctcagttgagagttgc
cctggagacaagagccccccgggcgggtcagcggcgtcgaagagagcccggacggcttat
accagcgcacaactggtggaactggaaaaggagttccatttcaaccgctacctctgcaga
ccccgcagggtcgagatggccaacctgctcaacctcacggagaggcagattaagatctgg
ttccagaaccgcaggatgaagtacaaaaaggatcagaaagggtgtggcatgatgccctct
cccgggggacagtcccctcggagccccctcggcccatcacccgggggcgggggtggagga
tacctcaactctatgcattctctggttaacagtgtaccctatgagtcccagtcgccaacg
tcttacaataagcccgctcataatgcatacggtatgcctacgtcatatccccctcccttg
aacagctccctaaacaactgcccgccctctcagaagaggtatcccgggactggcggctcg
gccacgcccgagtatgacgcgcatcctctccaaggaaatggcggctatgggacgcacttg
cagcaggtcagccctgtgtatgtaggcggaggttacatcgattcgatgcccaacaacagg
gcctccgttttcggcctgacccatctctcgcacccgccgtccacaaacatggactacaat
ggagcaatcactatgggcaatagtcaccatcaaagagtgtgcgatccaaacccgacatac
acagaccttaatacgccgcactactctcagggaagaattcaggaagcgcccaaactgaca
catctgtag
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