Oncorhynchus tshawytscha (Chinook salmon): 112266522
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Entry
112266522 CDS
T05605
Name
(RefSeq) growth/differentiation factor 5-like
KO
K04664
growth differentiation factor 5
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04060
Cytokine-cytokine receptor interaction
otw04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
112266522
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
112266522
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
otw04052
]
112266522
Cytokines and neuropeptides [BR:
otw04052
]
Cytokines
Transforming growth factors (RSTK binding)
112266522
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Gene cluster
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
Motif
Other DBs
NCBI-GeneID:
112266522
NCBI-ProteinID:
XP_024299839
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Position
LG02:complement(57601487..57606652)
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AA seq
538 aa
AA seq
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MKVLKRLPLLLGCWTLLYLEFIPVSLSHTGTAQRATESRGKKHAGGAGKEANPGITSTAR
STVGNYGVAGWKSPSAARITRIRTGPPLIKGEAAEAKAVTSVSSPHGVTASSVSGTINLG
RKESARSWGPDGDATNAAAVPVLMALNVQTRKGGDTPRQSKGKTFPRVATSARTGQHRVI
AVQKYSAPLAQRSAKATDKLSDRDLPKHPLVTPHDYMLSLYWSLSTGEVNTSVLHEAGMA
NTITSFVDKGQDDRLLQLRRQKYNFNISSLEEEGLLGAELRILRKRLADPRKALSTGRVF
CLKLFTCAAGKQKATLLQTRTIEDHNTPKWEVFDIWKLFKNFHNTVQLCFELEALERGRP
VDLRAMGFSRLGRQTKEKAFFLVFGRTKKRDLFYSEIKARSGHDNKTVYEYLFTQRRMRR
APTTRGKKLAKNPKPRCHRKQLHVNFKEMGWDDWIIAPLEYEAYHCDGVCDFPIRSHLEP
TNHAIIQTLMNSMDPDSTPPTCCVPTRLSPISILYIDSANNVVYKQYEDMVVESCGCR
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtcctgaaacgtctccctcttttattggggtgttggactctcttatacctggaa
tttatcccagtgtcactgagccataccgggacggcacagcgcgcaaccgagagccgaggc
aagaagcacgcaggcggagcaggtaaagaagccaacccgggaatcacctcaactgccagg
tctacggtaggaaactacggggtagcgggttggaagtctccgagcgctgcgaggatcacg
cgcattaggacaggacccccgctgataaagggcgaggcagccgaagcaaaagctgtaaca
tcagtgtcatcaccacacggcgtaacggcgagtagtgttagtggaactatcaatttggga
cgcaaggagtctgcgcgctcttggggacccgacggggatgctaccaacgcagctgctgtg
cctgttctcatggcgttgaacgtgcaaacacgcaaaggcggagatacgcccagacagagc
aaaggaaagacgttccccagagttgcaacatcagcacgaactggacagcatagagtcatt
gctgtgcaaaaatacagcgctccgttagcccaaaggagtgccaaagcaacggacaaactg
agcgacagagaccttccgaagcacccattggtgactccgcacgactacatgttgtcactg
tattggtcactatccacaggggaggtgaacaccagcgtgttgcacgaggctggcatggcc
aacaccatcaccagctttgtggataaaggacaagatgaccgtcttctccagctgagaagg
cagaagtataacttcaacatcagttccctggaggaggaggggttactgggtgccgagctg
cgcattctcaggaaaagactggccgacccacgcaaagcactttctactggcagagttttc
tgcctgaagcttttcacctgtgcagcaggtaagcagaaagcgacactgctccaaactcga
accatcgaggaccacaatacgcccaaatgggaagtgtttgacatttggaaactattcaag
aatttccacaacaccgtccagctttgtttcgagctggaggccttggaacgaggccgccca
gtggacctcagggcaatgggcttcagtcgtctgggcaggcagaccaaagagaaggccttt
ttcctcgtgttcggacgcaccaagaaacgcgacttgttctacagcgagatcaaagcccgg
tcgggccacgacaacaagactgtgtacgagtacctgttcacccagcgccgtatgcgccga
gcccccaccacccgtggcaagaaactggccaagaaccccaagcctcgttgccacaggaag
cagctacatgtcaacttcaaggagatgggttgggatgattggatcattgccccactggag
tatgaggcctaccactgcgacggggtgtgcgacttccccatccgctcgcacctcgagccc
accaaccacgccatcatccagacgctcatgaactccatggatcctgactcgactccgccc
acctgctgcgtgcccactcgcctcagcccgatcagcatcctctacattgactcagccaat
aacgtggtttacaaacagtacgaggacatggtggtggagtcctgtggctgcaggtag
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