Oncorhynchus tshawytscha (Chinook salmon): 112267451
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Entry
112267451 CDS
T05605
Symbol
pax3b
Name
(RefSeq) paired box protein Pax-3-A isoform X1
KO
K09381
paired box protein 3/7
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112267451 (pax3b)
Transcription factors [BR:
otw03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
112267451 (pax3b)
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Gene cluster
GFIT
Motif
Pfam:
PAX
Homeodomain
Pax7
HTH_23
Homeobox_KN
HTH_32
SEEK1
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
112267451
NCBI-ProteinID:
XP_042153510
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Position
LG14:43431517..43477243
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AA seq
496 aa
AA seq
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MTALAGAIPRMMRPMLAQNYPHSGFPLEVSTPLGQGRMNQLGGVFINGRPLPNHIRHKIV
EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQGTTPDVEKRIEE
YKRDNPGMFSWEIRDKLLMDGICDRNTVPSVSSISRIMRSKFGGKGDDDDDEDEIEKKEL
EEHERRAKHSIEGILGDRSSHSDEGSDVESEPDLPLKRKQRRSRTTFTAEQLDELERAFE
RTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGASQLMAFNHLIPGGFPPSAM
SSLSPYQLSDSPYPPTSISQVVSEQASTLHRPQPLPPSSGHHQSSGGGGQDGGSAYCLAS
GRHSFTGYSDSFVTSGGPPMNPAISNGLSSQVMGLLNPGGVPHQPQSDYALSPLTGGLEP
PGGMGASCSQRLEHIKSLEGLSSVPNIPSLPSLPNSQSYCPSSYSAPAYSVDPVASYQYG
QYHGQSALHYLRPEIT
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgactgcgttggctggggcaataccaaggatgatgcgccccatgctggcgcagaactac
ccccacagtggcttcccactggaagtctctaccccgttaggccaaggcagaatgaaccag
ctcgggggagttttcataaatggcagacctttgcccaaccatatccgccataagatcgtc
gaaatggcccaccatggcatcagaccatgcgtaatctcccgtcagctccgcgtctctcac
ggttgcgtttctaaaatcctctgccggtaccaggagaccggctctattcggcccggggcc
atcgggggaagcaaacccaagcaggggacgacgcctgatgttgagaagagaatagaggag
tacaagcgggacaacccgggtatgtttagctgggagattcgggataaattactgatggat
gggatatgtgaccggaacaccgttccatcagtgagctctatcagtcgcatcatgaggagt
aaattcggagggaagggagatgacgatgatgatgaagatgaaatcgagaaaaaggaatta
gaagaacacgaacggcgggccaaacacagcatcgagggcattttaggagaccgatcaagc
cactcagatgaggggtcggacgtggagtctgaaccagacctgcctctgaagaggaagcag
cgccgcagtagaaccaccttcactgccgaacagctggatgagctggagagagcctttgaa
cgaacacactaccctgacatctacaccagggaagagctggctcagagggccaaactcaca
gaggccagagttcaggtgtggttcagtaacagaagagcccggtggaggaagcaggctgga
gctagtcagctcatggccttcaatcacctgatccctgggggcttcccgccctctgccatg
tccagtctctcaccttatcagctgtctgacagcccgtatccccctacatccatatcacaa
gtggtgtcggagcaggccagcacgctgcaccggccccagcccctgcccccgtcctcaggc
caccaccagagctcaggagggggaggacaggatgggggttctgcctactgcctggcctct
ggacgccacagcttcacaggctactccgacagcttcgtcacgtcaggaggccctcccatg
aaccctgccatcagcaatggtctctcttcacaggtgatgggtctgttgaacccaggtggg
gtgccccaccagccccagagtgactatgccctctcccccctgacaggaggcctggagccc
cctgggggcatgggggccagctgctcccagcgtctggagcacatcaagagtctggagggc
ctgtccagtgtccccaacatccccagtctcccctcgctgcccaactcccagtcctactgc
ccgtcctcctacagcgctcctgcctacagtgtggaccctgtggcctcctaccagtatggg
cagtaccacggacaaagtgcccttcattatctgagacctgagatcacctga
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