Oncorhynchus tshawytscha (Chinook salmon): 121843603
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Entry
121843603 CDS
T05605
Name
(RefSeq) tripartite motif-containing protein 16-like protein
KO
K12006
tripartite motif-containing protein 16
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
121843603
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
121843603
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
ZapD
Fib_alpha
Y1_Tnp
Spc24
T3SS_basalb_I
CCDC92
DUF445
Motif
Other DBs
NCBI-GeneID:
121843603
NCBI-ProteinID:
XP_042169265
LinkDB
All DBs
Position
Unknown
AA seq
484 aa
AA seq
DB search
MAGVEGLFSWLGAWFALSLSLSLSLSLSLSVSLCLSLSLSLSLSVSLSLCLSLSLSLQRS
AQSAVEDSDQIFTELIRSIERRSSEVKELIRAQEKAQVSQAEGLLEQLKQEIAELRKRST
ELEQLSHTEDHIHFLQSYQSLSSISVSSDLPSIVVRPLQSFGDVSKTVSELREKLEDFLK
GEWTKISTTVNIVDVVLPPEPKTREQLLQYSCQLTLDPNTADTRLSLSEGNRKVTRTDQV
QPYPDHPDRFTNYRQVLCREGLSGRCYWEVERTGVVLTAVSYKDISRTETDSGFGLNNKS
WSLKCYRGGYCFRHNNVETKVSGPQSSRVGVYLDHKAGTLSFYSVSDTMTLLHRVVKQTT
FTQPLYPGFSLCEDAPSPTLLLPDRHLTVTWQGGRTPVPHYFSRTGGRTQSHTTSPGPSL
DCDLAGRTHPVPHYFSRTVKTVTWQGGRTQSHTTSPGPSLDCDLAGKDAPSPTLLLGPSL
DCDL
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggcgggggtggagggcctgttctcttggttgggagcctggtttgctctctctctctct
ctctctctctctctctctctctctctctctgtctctctctgtctctctctgtctctctct
ctctctctctctgtctctctctctctctgtctctctctctctctctctctccagcgctct
gcacagtcagcagtggaggacagtgatcagatctttactgagctgatccgctccattgag
agaaggagctctgaggtgaaggagctgatcagagcccaagagaaggctcaagtgagtcaa
gctgaaggactcctggagcaactgaagcaggagatagctgagctgaggaagagaagcact
gagctggagcagctctcacacacagaggatcacatccatttcctccagagttatcagtct
ctctccagtatcagtgtatcttcagacttacccagcatcgttgtccgtcctcttcagtcc
tttggagatgtgagtaagactgtgtctgaactgagagagaaactagaagacttccttaaa
ggagaatggaccaagatctccactacagtgaatatagtggatgttgtactgcctccagag
cccaagaccagagaacagttgttacaatattcctgtcagctcacactggacccaaacaca
gcagacacacgcctctctctgtctgaagggaacagaaaggtgacacgtacagaccaagtc
caaccatatcctgaccatccagacagattcaccaactacaggcaggttctgtgtagagag
ggtctgtctggacgctgttactgggaggtggagaggactggtgttgttcttacagcagtc
tcatataaagacatcagcagaacagagacagatagtggatttggactcaataacaagtcc
tggagtttaaagtgctatagaggtggttattgtttcagacacaataatgttgagactaaa
gtatcaggccctcagtcctccagagtaggagtgtacctggatcacaaggcaggtactctg
tccttctacagtgtctctgacacaatgaccctcctccacagagtggttaaacagaccaca
ttcactcagcccctctatcctgggtttagtctctgtgaggacgcacccagtcccacacta
cttctcccggaccgtcacttgactgtgacctggcagggaggacgcactccagtcccacac
tacttctcccggaccggaggacgcacccagtcccacactacttctcccggaccgtcactt
gactgtgacctggcagggaggacgcacccagtcccacactacttctcccggaccgtcaag
actgtgacctggcagggaggacgcacccagtcccacactacttctcccggaccgtcactt
gactgtgacctggcaggaaaggacgcacccagtcccacactacttctcggaccgtcactt
gactgtgacctg
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