Oncorhynchus tshawytscha (Chinook salmon): 121845651
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Entry
121845651 CDS
T05605
Name
(RefSeq) LOW QUALITY PROTEIN: glypican-5-like
KO
K08111
glypican 5
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
otw00535
]
121845651
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
otw00537
]
121845651
Proteoglycans [BR:
otw00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
121845651
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
otw00537
]
Others
121845651
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glypican
Fz
DUF3038
VopS_N
Motif
Other DBs
NCBI-GeneID:
121845651
NCBI-ProteinID:
XP_042173230
LinkDB
All DBs
Position
Unknown
AA seq
567 aa
AA seq
DB search
MGLQKMLCCLFVAACVGLISPVGSLTSCDEVRKVFQLRQIGPVKSLPKRPREGSDLQVCQ
SRNLTCCSKKMEERYQVAARRDVQNLLQTSSASLKFLISRNVAAFQESFESLIKASENHT
NLVLQASYRNMAGEASGLVRELFTDVGLFLLGSELNIDDITSRFFDALFPLVYHHLINPS
LSRVTPGYAECVRSARRDLSPFGAAPGVLANQIGRSGVGGRVLLQALHLGIEVINTTDHL
VFSRECRRALLRMQYCPHCHGLTLSKPCMGYCLNVMRGCLASMAEVDLHWREFVRSLEGL
SARMHGTQDLEQVLLGVHAVVHDAVAHGQRNGPHLSAQVYKVCGRPSRQPAQSVSGQQDG
ASIPLKAFIRETGNSLATRRKEFLNSLRLYRTFYGGLADQLCVNQLASXDGLACWNGADV
VKSYTLRVVGNGIKAQTANPEVKVKEGDPVIHQIIDKLKHINQLLQGKSIPKFGTLDLIE
TGSGNGEGRGYSGDCDDEDGCGGSGGGEVKRKVMTVSKRKSPQTTSGFSLVHSLVCLRQH
AVTQQLSFLPHVLCLSHNNLVSFLTSS
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgggactacagaagatgctgtgttgtttgtttgttgctgcttgtgttgggctgatttca
cctgtgggaagtctaacgagctgtgatgaagtgcgcaaagtttttcagctgcggcagatt
ggaccagtgaaatcactgcccaagagaccgagagaaggttcggacctccaggtgtgccag
tccaggaacctgacatgctgttctaagaagatggaggagaggtatcaggtggcggcccgg
cgggatgttcagaacctcctccagacctcctccgccagcctcaagttcctcatctccagg
aacgtagcagccttccaagaaagctttgagtccctgataaaggcatcagagaaccacacc
aacctggtcctccaggcgtcgtaccgtaacatggctggggaggcgtcaggtctggtgaga
gagttgttcactgacgtcggcctcttcctccttggctccgaactcaacattgatgacatc
accagccgcttctttgacgctctcttcccattggtctaccaccacctcatcaaccccagc
ctcagccgcgtcacccccggttacgccgagtgcgtccgctccgcccgccgcgatttgtcc
ccgttcggcgctgctccgggagtcctagccaatcagatcgggaggtcgggggtcgggggt
cgtgtgctgttacaggcgctgcacctcggcatagaggtgatcaacaccacggatcacctg
gtgtttagcagggagtgtcgtagagctctgctcaggatgcagtactgtccccactgccac
ggactcaccctgtctaaaccctgtatgggctactgtctcaatgtgatgcgtggctgtctg
gctagcatggctgaggtggacctccattggagagaattcgtgaggtcgttagaggggctg
tcggcacgcatgcacggaactcaggacctggagcaagtgctgctgggagttcacgccgtc
gtccacgacgccgtcgcacatggtcagaggaacgggccacacctctctgcacaggtgtat
aaagtatgtggtcgtcccagtagacagcctgcccagtcagtcagcggccagcaggacgga
gcgtccatccctctcaaagccttcatcagagaaacaggaaacagcctggctaccaggagg
aaagagttcctgaacagtctgcgtttgtaccgtaccttctacggtggcctggcggaccag
ctgtgtgtgaaccagctggcctccnccgatggactggcctgctggaacggagccgacgtt
gtcaagagctatactctgagagtggtgggtaatggaatcaaggcccagactgctaatcca
gaggttaaagtgaaggaaggggacccagtcatccatcagatcattgataaactcaagcac
atcaatcagctgctgcaggggaagtccatccccaagtttggaacgttggatctaatcgaa
acaggaagcggaaatggtgaggggcgtggctacagcggagactgtgatgacgaggatggg
tgtggcggatcagggggtggagaggtcaagaggaaggtcatgacggtctctaaacgtaag
tcgcctcagaccacttcaggtttcagccttgttcattcacttgtttgtttacggcagcac
gctgtcacacaacaacttagtttccttcctcacgtcctctgtctgtcacacaacaactta
gtttccttcctcacgtcctct
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