Oncorhynchus tshawytscha (Chinook salmon): 121846672
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Entry
121846672 CDS
T05605
Name
(RefSeq) synemin-like
KO
K10376
desmuslin
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
121846672
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type VI
121846672
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Motif
Other DBs
NCBI-GeneID:
121846672
NCBI-ProteinID:
XP_042179084
LinkDB
All DBs
Position
LG06:28581205..28590794
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AA seq
1030 aa
AA seq
DB search
MLQFRRSVEAEKHQLQELNNRLGQYLSRTMQLEHDNAILKTEINKIRQEKTVEWDNQCMA
EMRDLRRMAGQLSFEKSRAETEREKLWQEFQMLQLMCCEEQVVCKDIGGELKGCEKQLHK
AQQTNGELEERLFQLENEYKFIEDAHRQEMTKLRSQVHSRPIVTQTYHGPPVVSMEEMQH
YALSLSEGWTDTLEVYRRKVEDMEESINADQTRLDDLQREKMQYASEFDKLRKEAEKQGQ
IQIHLEEQLIYMQENFHGDITQYQVIIDQLEWEREMLANTMAEKVRDHQQLLQVKMDLGM
EVAYYRALIEGDHQQHLQSRGRVIDIKMMPPQQYKPRVFTSTRQDVRKHLDVKYMEPTSS
LRRSPVPSQYGHTSPSRVIPISVKGSSYNRNQSPTTRRDMVSFTKSQSASSSSSSTTVKP
VAQSTVRKNIDAQKKVVEERSVRIKEVSQHSAKDSLDHSRGTANTSSPIASPTADPNSVR
IVSPPMMSLSRNTEEDSKKKAERQVEREVRGDAFGLQNVKMHAKDGSITATTTSDKMVLD
SVSMEELIEKVMKPAGLDRKVCSSSPDSKITYHVEKTEKEDGSTKTQIILESKVQEELDM
SEDFALEELLSKEVKHVSLEDIKGTATGNMIQNLLSLGLHGGEDMGNKTVNVEIIEEPVE
GYSDEEYEFEEKSTPKFSQPSSMFFQIEELENDPHGTIYHESGAEVMKTSMTVANYGSNG
GSVKVQEDFRDSESPYYSHNQESQEYFVSTPDGNLSEPEEGGGIASYGHGERPSSGGRMV
DDFSDETYYQEGEVSKNRIFVEESDSYRPASDSQYMKDDHSFAQNSYSECIIEEETIRVS
PTVQESMLGYLREETLDPKEQLRGALEQLQGTVSGSLKEELALLTRRGSDSPQNISVDIK
KVHESSNNGTTTIVAELKSSTTLEDSGQLGEQGDDVSEEQIMAALCSSNLGAEGGYTLDT
KEMCWVTSSEGQGGESSTDVTEKHIKLGQSEKSFPFQMDVNNGQGQDPPLKVTHKKRVAT
VYLESNEDEF
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgttacaattcaggagaagcgttgaagccgaaaaacatcaattacaggagctcaacaac
agactgggccagtacctgtcaagaacaatgcaattggagcatgacaacgcaatcctcaaa
actgaaataaacaagataagacaagagaagacagtggaatgggacaaccaatgtatggcc
gaaatgcgggacctgaggagaatggcggggcaactatcttttgaaaagtcccgagccgag
actgaacgagagaagctttggcaagagtttcagatgttacagttgatgtgttgtgaggag
caggtagtatgcaaagacataggtggagagctaaaaggttgcgagaagcagcttcataaa
gctcaacagaccaatggggaacttgaagaacgtctgttccagcttgagaacgagtacaaa
ttcattgaggatgcacacagacaagaaatgaccaagctccggagccaggtgcattcacga
cctattgttacccaaacctaccatggtcctccagtggtctcgatggaagagatgcaacat
tatgccctcagcctgtccgaaggatggactgacaccttagaggtgtatcgaaggaaggtc
gaagatatggaggaatcgatcaacgcggaccagacgaggctggatgatctccaaagggaa
aagatgcagtatgcctcagagtttgacaaattacgtaaagaggctgaaaagcaaggtcag
attcaaatacacctggaggaacagctcatatacatgcaggagaacttccacggggacatc
acccagtatcaggtgattattgatcagttggagtgggagcgggaaatgttggccaacacc
atggcagaaaaggtcagagaccatcagcagctactgcaggtcaagatggatctgggcatg
gaggtggcttactacagggcgcttattgaaggagatcatcagcagcatctgcagtcaaga
ggaagagtcatagatattaagatgatgcctccacaacagtacaaaccaagagttttcaca
tcaaccagacaggatgtaaggaaacatctggatgtgaaatacatggagccaacctcaagc
ttgagaagatcacctgttccatctcagtatggtcacaccagtccttccagggtcatacct
atctcagtcaaaggaagcagctacaacaggaatcagagtcctaccaccagaagggacatg
gtctcattcactaaatcccagtctgcatcctcaagctcttcctccactacagttaaacct
gtggcccagagtacggtcaggaaaaatatagatgctcagaagaaagttgtggaggagagg
agtgtgagaatcaaagaggtgtcacaacactcagctaaggattctcttgaccattctcga
ggcacagcaaacacatccagtcccattgcctcacccactgctgaccccaattcagtaaga
atagtgtcaccaccaatgatgagtcttagcagaaacacagaggaggacagcaaaaagaaa
gcagagaggcaagttgaaagagaggtgagaggagatgcatttggtcttcagaatgtaaag
atgcatgccaaagatggcagcattacagcaaccacgacaagtgataagatggtcctagac
tctgtgtctatggaggaactcattgagaaggtcatgaaacctgctggtttggatcgaaag
gtctgcagctcatctccagactccaagatcacttaccatgtggagaaaacggagaaggag
gacgggtcaacaaagacacagattatcctggagtccaaggtgcaggaggagctggatatg
tcagaggactttgcactggaggaacttctcagcaaggaagtgaaacacgtgtcactggag
gatatcaagggcactgcaacaggaaacatgattcagaatctgctcagccttgggctgcat
ggaggagaggacatgggaaacaagactgtcaatgtggagatcattgaggaaccagtggag
ggttacagtgacgaggagtacgagtttgaggagaagtccacacccaagttctcccagccc
tcttcaatgttctttcagattgaagaactagagaatgaccctcacggcaccatataccat
gagagtggtgctgaagtaatgaaaacctccatgacagtagcaaactatggcagtaatggt
ggatctgtgaaggtccaggaagacttcagagatagtgaatctccatactacagccacaac
caagagtctcaagagtattttgtctccacacctgatggaaatctgtcagagcctgaggag
ggtggtggtatagcatcatatggacatggtgaacgaccctccagtggtggacgaatggtg
gacgacttttcagatgaaacgtactaccaggagggggaagtctcaaagaacagaattttt
gttgaggaaagcgatagttacagacctgcatcggacagccagtacatgaaagatgaccac
tcctttgcccaaaatagttactcagagtgcatcattgaagaggagaccatccgtgtctcc
cccacagtgcaggagtcaatgcttggatacctgagagaggaaactctggaccccaaagag
cagctgagaggagccctagagcagctccaaggaacagtgtcagggagcctgaaagaagag
ttggctctcctcacaagacgtggcagtgatagtcctcagaacatatctgtggacataaaa
aaagtacacgagtcctctaacaacggaaccacgactattgtggcagagctcaagagctca
acaactctagaggactctgggcagctgggggagcagggggatgatgtatctgaggagcag
atcatggcggctctatgctcctccaaccttggagcagagggaggatacaccctggacaca
aaggagatgtgctgggtgactagcagtgagggacagggaggcgagtcctcaactgatgtc
actgagaagcacatcaagctggggcaatcagagaagtcattccccttccagatggatgta
aataatggccaaggacaggatcccccactgaaggtcactcataagaaaagagttgccaca
gtctatcttgaatctaatgaagatgagttctga
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