Oligella urethralis: CEQ07_00560
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Entry
CEQ07_00560 CDS
T05343
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
our
Oligella urethralis
Pathway
our03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
our00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CEQ07_00560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
our03400
]
CEQ07_00560
Enzymes [BR:
our01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CEQ07_00560
DNA repair and recombination proteins [BR:
our03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CEQ07_00560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
Helicase_C
PriA_C
AAA_30
AAA_22
Helicase_C_2
nSTAND3
AAA_16
AAA_19
SRP54
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
AVL70067
LinkDB
All DBs
Position
120062..122266
Genome browser
AA seq
734 aa
AA seq
DB search
MQRPWVRVALALPMADLFDYRLAEGMQAMIGQRVRVPFGAKELIGFVIERPEQPAYEESS
IKEVLEVYDDLPPMPTDWLDFGRFAASYYQRPLGEALLSTLPTPLKNPKAYTGTRAAGGP
VQRLLKRQASAAKKAAKAAAKERQQAEEDGTDTAVSSLGQSAEVAEAESPQRPQLSAAQR
TAFQHITAIEGYKTVLLHGVTGSGKTEVYLHVAEHILAQGKQVMILVPEINLSPQLQAKF
QERFPHEQIAILHSNLSDGERLAAWVAVQTKQAGIILGTRMAIFAPVQNLGLIVIDEEHD
ASYKQLDALRYSARDLAVWRGHQLNIPVVLGSATPSLESWQHAKEAKYDLCSLPERVGAL
AFKPSFEFIDTRKTPLVEGISQQMLNEIQHCIERGQQALVFINRRGFAPVLHCPACAWNS
ECSRCSAFMVMHRLPSGGHGTKRHSGPPTYQLQCHHCGLQRRPPSACPDCGNTDIQPLGR
GTQKVEEYLRQQFPDARIQRIDADSTKRKGQAEELFNRVHEGKIDILVGTQMVSKGHDFK
NLNLVCVLNADAGLYAHDFRSSERLFAQLLQVAGRAGRHLPGGKVLIQSNELNHPLYLAL
QRQDYELFAEHTLQERRLAQLPPFSFQTLVTASSKEIERCLAFLEEIKAIVLAEDYADEP
TYQHLRELQTGIRFYDPVPLRIVRVFHMERAQLLIESASRARLQRFLPYWAEQIAKIAKK
HRLKYVIEVDPLEI
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgcagcggccttgggtgcgcgttgccttggctttgccaatggctgatttattcgattat
cgtttagcagaggggatgcaagcgatgattggtcagcgcgtgcgtgtgcccttcggcgcc
aaggagctgattggctttgtgatcgagcgaccagagcagcctgcgtatgaggaatcgtca
atcaaggaggtgttagaggtctatgatgatttgccgcccatgccgacggattggttggat
ttcggtcgttttgctgccagttattatcagcgcccattgggtgaggcattactatccact
ctccccacgccactgaaaaaccctaaggcctatactggtacccgtgctgccggtggaccg
gtacagcggctattaaaacgtcaggcttcggctgctaaaaaggccgccaaagcagcggca
aaagagcgtcaacaggcggaagaggatggaactgacaccgccgtgtcgagtctaggccag
tctgcagaagtggcggaggccgagtcgcctcagcgtccgcagttatctgcggcacagcgc
actgcttttcagcatatcacagcgattgagggctataagacggtgttactgcatggggtg
accggtagtggtaagaccgaggtatatttgcacgtggctgagcatatattggcgcaaggt
aaacaggtgatgatattggtgccagagattaatctcagccctcaattacaagctaagttt
caagagcgatttccacatgagcagatagctattctgcacagtaatttatctgatggtgag
cgtttggcagcttgggtggcggtgcagacgaagcaggcgggcatcatcctcggcacgcgt
atggcgatttttgcgccggtgcaaaatctcggtttgattgtgattgatgaagagcacgac
gcctcctataagcaattagacgccttgcgttattcggccagagacttggcagtgtggcgt
ggacaccaattaaatattccagtggtcttaggctctgctacgccatccctggaaagctgg
caacatgccaaagaggcgaagtacgatctttgcagcttgcctgaacgggtgggcgccttg
gcctttaaaccgagttttgagtttatcgatacacgcaaaacgcctttagtggagggcatt
agtcaacagatgttgaacgagattcagcactgtattgaacgaggtcaacaagcattggtg
tttattaatcggcgtggttttgcgccggtgttgcattgccctgcctgtgcttggaatagt
gagtgcagcagatgctcggcttttatggtgatgcatcgcctgccgagtggtggtcacggc
actaagcgccacagtggacctcctacttatcagttgcaatgtcatcattgtggtttgcag
cgacgtccgcctagcgcctgtccggactgtggtaatacagatatccagcccttaggacgc
gggacgcaaaaggtagaagagtatttgcggcagcagtttcccgatgctaggattcagcgc
attgatgctgatagtaccaagcgtaagggacaggctgaggagctttttaatcgggtgcat
gagggcaagatcgatattttggtcggcacacaaatggtgtccaaagggcatgattttaaa
aatcttaatttagtgtgtgtattgaatgcggacgccgggctatacgctcacgattttcgc
tcctcagagcgactatttgcgcagttattgcaggtggcgggtcgcgccggacgtcatttg
cccgggggcaaggtcttaattcaaagtaatgagctcaatcatccactctatctagcctta
caaaggcaggattatgaactgtttgccgagcatacgctacaagaacgacgtctggcgcag
ttgccgccgttttcctttcagaccctagtaacggcaagtagcaaagaaattgaaagatgc
ttagcatttttagaagaaattaaagccattgtgctggctgaagactatgcggatgagcca
acttatcagcacttacgcgagctacaaacgggaatccgtttctatgatcccgtgccttta
cggattgtgcgagtgtttcatatggagcgggcgcagctgttaattgagtcagcctcgcgc
gccagattgcagcgttttttaccctattgggctgagcagattgcaaaaatcgctaaaaag
catcggctaaaatacgtgattgaagtcgatccgctagagatttaa
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