Oscillibacter valericigenes: OBV_20710
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Entry
OBV_20710 CDS
T01636
Name
(GenBank) putative pseudouridine synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
ova
Oscillibacter valericigenes
Brite
KEGG Orthology (KO) [BR:
ova00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ova03009
]
OBV_20710
Enzymes [BR:
ova01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
OBV_20710
Ribosome biogenesis [BR:
ova03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
OBV_20710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
APG12
Motif
Other DBs
NCBI-ProteinID:
BAK99269
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All DBs
Position
complement(1959451..1960410)
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AA seq
319 aa
AA seq
DB search
MREFSINKNDAGQRLDRFVAKATPLLPPALVQKYIRLKRVKVNGRGSRREVRLEAGDAVQ
MYINDEFFQEPDEKEDKFLSAFRAQLDILYEDENLLLVNKRPGLVVHADETEKVNTLVHH
IQAYLYQKKEWDPAAENSFTPALCNRIDRNTGGIVIAAKNAEALRIINDKIRTHELRKTY
LCVVIGRPNPPAGKIEGFLLKNEQKKQVSFYRRPVPGGRSAVTYYQTLQTREALSLVKCE
LLTGRTHQIRVSMAEIGCPLLGDGKYGRGEVNRSYHEQKQCLWSYQLAFAFKTDAGLLEY
LRGKVFEVENIPFKNRYFS
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgcgggaattttccatcaacaaaaatgacgctggacagcggctggaccggttcgtggcg
aaagccacgcctctgctccctcccgctctggtgcagaaatatattcggctgaagcgggtg
aaggtcaacggcaggggctcccggcgggaggtccggctggaggctggcgatgccgtgcaa
atgtatatcaacgacgagttctttcaggagccggatgagaaggaggacaaatttctctcc
gcgttccgcgcgcagctggacatcctgtatgaggatgaaaacctgctgctggtcaataag
cgcccgggccttgtggttcacgccgacgagacggagaaggtgaatacgttggttcaccac
atccaggcgtacctgtatcagaaaaaggaatgggacccggcggcggagaactcctttacc
ccggccctttgcaaccgcattgaccgcaacaccggcggcattgtcatcgccgcaaaaaac
gcggaggctctgcgcatcatcaacgataagattcgcacccacgagctgaggaagacctat
ctgtgcgtagtgataggcagaccgaacccccccgccggaaaaattgagggcttcctcctg
aagaacgaacagaaaaaacaggtttctttctaccgccgtcccgtccccggcgggcgcagc
gccgtcacctactatcagacgctgcaaaccagagaagcgctgtctttggtgaagtgtgag
cttttaacaggccgaacccaccagatccgcgtctccatggccgagatcggctgccccctg
ctgggggacggcaaatacggtcggggcgaggtaaatcggagctatcacgagcagaagcag
tgtctgtggtcgtatcagctggcctttgcattcaagaccgatgccgggcttttggaatat
ctgcggggcaaagtcttcgaggtggaaaatattccattcaaaaaccgctatttttcttga
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integrated database retrieval system
