Opisthorchis viverrini (Southeast Asian liver fluke): T265_14961
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Entry
T265_14961 CDS
T04902
Name
(RefSeq) hypothetical protein
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
ovi
Opisthorchis viverrini (Southeast Asian liver fluke)
Pathway
ovi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ovi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
T265_14961
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ovi03041
]
T265_14961
Enzymes [BR:
ovi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
T265_14961
Spliceosome [BR:
ovi03041
]
Complex A
U2 snRNP components
U2 related factors
T265_14961
Complex B
T265_14961
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
20329127
NCBI-ProteinID:
XP_009174256
UniProt:
A0A074ZFK3
LinkDB
All DBs
Position
Unknown
AA seq
1068 aa
AA seq
DB search
RRDDDYSRHSRRRRSRSRSPVLHRRAFSTTLEGSLPAANGLPDVSSLPPTSLMGSLLAQA
KAAEEAAAKAKAAATSKPATVGAMTAIANAAADRIKAARTGGLGVSGIEGALIVSENLDK
DVEQRRLDQEMQKVTELVYILLIHILVQRRERIERWRRERKLKQDILSVQQRIVETARQP
RSAKWNLDDDDDEEDTSKKSAPSKQTAEDEIDPLDAFMQTVNEEVKSYSDRNQTPTTAPT
PKTNQSKPPAGTKPPPKTATPAVNSKPPLKKRVIGKGELMESNIDEMEYSSEEEEETLED
ALAHLQKKEKLLPVDHSKIHYRPFRKNFYIEVPELAKMSKEDVKAYRASLENIRVRGQDC
PKPLKNWVQAGISSRLLSCLKRNNFDKPTPIQCQALPVLMSGRDMIGIAKTGSGKTLAFL
VPLMRHLEHQDPLEPGDGPIALLLAPTRELALQIFKEAKKLAQAVDARVVCVYGGTGISE
QIAELKRGAEIIVCTPGRMIDMLAANGGRVTNLRRCTYIVLDEADRMFDLGFEPQVMRIV
ENCRPDRQTAMFSATFPRQMELLARKALTLPIEIQVGGRSVVCSDVEQHALVLTEDEKFY
KVLELLGIYQEAGSVLIFVEKQESADELMRVLLKYGYPCLSLHGGIDQYDRDSVMTDFKR
GNIRLLIATSVAARGLDVSDLMVVINYDCPNHYEDYVHRCGRTGRAGNKGFAYTFLTPDQ
ERNAGDVVRAFKQSGQKPPEDLLVMWNSYKTRMAAEGKKVFGSSGFRGKGFMFDEAEAQL
NSEKRRAQKAALGLQDSDEEEADPSSLDWESKIEDMLASKRKVTDVAKSSIGELTTDTAA
ASAQTASTPLSAALALARQKAAQLGINKNLGTTAPVTRADATQATAIAVLSGTTPPPTVG
PASASVAAAAAAAAAVTTGITSSRTLAEQAAEKLNAKLGYSKQTVAGSGEEEPNAPAGSD
VVRRFEEELVINDFPQSVRWRITGRDMLNHLNDFCNVGVSVRGVYMPPAKAKTHVPEGSD
DRPLYLCIEAVTEREITIAKKEIMRVIKEEMLKVQSGSASSRGRYKVV
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
cgacgcgacgatgactactcacgccacagtcggcgcaggcgctcacgatcccgttctcct
gtgttacatcgacgggcgttttccacaactctcgaaggttcacttccggcagccaatggt
ttgccagatgtttcatccctacctcctacttcactcatgggctcacttttggcccaggcc
aaggcggcggaggaagctgctgccaaggcgaaagcggcagccacatccaaaccagctaca
gttggagcaatgaccgcaattgcaaatgccgcggcagatcggatcaaagccgcacgtact
ggtggtctcggcgtttcagggatagagggagcattaatcgtcagtgaaaatttagataag
gatgtggagcagagaagacttgaccaggaaatgcagaaggtaaccgaattagtttacatt
ttgctcattcatattcttgtacagcgtagagaaaggattgagcgatggcggcgtgaacgc
aaactaaagcaagacatactgtccgtacagcagaggatagtggagacggcaaggcaaccc
cgatcagcgaagtggaatctcgatgacgatgacgatgaggaggacacatcaaagaagtcg
gctccgagcaaacagactgctgaggatgaaatcgacccgttggatgcattcatgcagacg
gtaaacgaggaggtcaagagctactcagaccgtaatcagactcccactactgccccaacg
cccaaaaccaatcagtctaagccgcctgccggaacaaaaccgcctccaaaaacggcaacc
cctgcagtaaactcgaagccaccgttaaagaaacgcgttatcggtaaaggggaactcatg
gaaagtaacatcgacgagatggaatactcttcagaagaagaagaagagacccttgaggat
gcgttggctcatttgcagaaaaaggagaaactactacctgtggatcattcgaaaatacac
tacagaccgtttcggaagaatttctacatcgaggttccggaactggccaagatgagcaaa
gaagatgtgaaagcctatcgagccagcttggagaatattcgtgttcgtggtcaggattgt
ccgaagcctttgaaaaactgggttcaagcgggaatcagttcacggttactcagttgtttg
aaaagaaataattttgacaaacccactccaatccagtgccaagctttgcctgtgctcatg
tccggccgggatatgattggaatagccaaaacaggtagtggtaaaacgctcgcgtttctc
gttccacttatgcgccatctggagcatcaggatcctttggaacccggagatggcccgatc
gcacttcttctagccccaacacgtgaactggctcttcagatattcaaagaggctaaaaaa
ctggctcaagctgtagacgcccgagttgtttgtgtgtatggtggaacaggaattagtgaa
cagattgctgaactcaaacggggagcagaaataatcgtttgtacacctggtcggatgatc
gatatgcttgcggccaatgggggtcgtgtaaccaatttgcgtcgttgcacatatatcgtt
ctggacgaggcggatcgcatgtttgatctcggattcgagcctcaagtaatgcgcatcgtc
gagaactgccggcccgatcgtcagacagctatgttctcagccacgttccccagacagatg
gagttgcttgcccggaaagcgctcaccttgccaatcgaaatacaagttggtgggcgatcg
gtcgtgtgttcggacgtggaacagcacgcactagttctcacagaagacgagaaattctac
aaagttctggaacttctaggcatctaccaggaagctggtagtgtcttaatattcgtggag
aaacaggaaagtgcagatgaactgatgcgtgtgctactgaaatacggctacccttgtttg
tccctacatggtggaatcgatcagtacgatcgcgactccgtgatgaccgacttcaagcga
ggcaatatccgtcttttgatagccacttcggtagccgcccgtggcttggacgtgtctgat
ttgatggtcgtgatcaattacgactgccctaatcactacgaggactatgttcatcgatgt
gggcgaactgggagggccggaaataaaggctttgcctacactttcctcactccggatcag
gaacgcaatgcaggtgacgttgttcgagcattcaaacaaagtggtcagaagcctccagaa
gacttgctagtcatgtggaactcgtacaaaaccagaatggctgcagaaggcaagaaggtg
ttcggatcctcgggtttccgtggtaagggcttcatgttcgatgaggccgaggcccagctt
aacagtgagaaacgtcgggcccagaaagccgctttgggtttgcaagactccgatgaagaa
gaagctgatccgtccagtctcgattgggagtcgaagattgaagatatgttggctagtaaa
cggaaggtgacggacgttgccaagagttccattggagaactgacaacagacactgccgct
gcaagtgcccaaacagcttccactcccctcagtgcagccttggccttagctcgtcaaaag
gctgcccaactgggtataaataaaaacctgggcacaaccgctccggtcacgcgtgcggac
gccacacaggccacagccattgcagtcctgtcgggtacgacgccgccacctactgtgggc
ccggccagtgccagtgtggcggccgcagcagctgctgccgcggccgtcacaacaggaatc
accagtagccggactctggccgaacaagcagccgaaaagctcaacgccaaattgggctac
tctaaacaaaccgtagctggaagcggtgaagaggagccgaacgctcccgcaggcagtgac
gtcgtacgcaggtttgaagaggaactggttataaatgactttccccaaagtgtacgttgg
cgcatcactgggcgtgatatgctcaatcacttgaatgacttttgcaacgttggtgtgtct
gtacgtggagtgtatatgcctccagcgaaagcgaagacacatgttcctgaaggaagcgac
gatcgaccactgtatttgtgcatcgaagctgtcaccgagcgagaaatcactatcgcgaag
aaggagataatgcgtgtaatcaaggaagaaatgttgaaagtgcagtccggaagtgcgtcc
agtcgcggacggtacaaggttgtttga
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integrated database retrieval system
