Pyrococcus abyssi: PAB0255
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Entry
PAB0255 CDS
T00024
Symbol
xerD-like
Name
(GenBank) xerC/D integrase/recombinase protein
KO
K04763
integrase/recombinase XerD
Organism
pab
Pyrococcus abyssi
Brite
KEGG Orthology (KO) [BR:
pab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pab03036
]
PAB0255 (xerD-like)
Chromosome and associated proteins [BR:
pab03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
PAB0255 (xerD-like)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
Phage_integr_3
Integrase_1
Motif
Other DBs
NCBI-ProteinID:
CAB49304
UniProt:
Q9V1P5
Structure
PDB
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All DBs
Position
372604..373464
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AA seq
286 aa
AA seq
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MEEREERVRDDTIEEFATYLELEGKSRNTVRMYTYYISKFFEEGHSPTARDALRFLAKLK
RKGYSTRSLNLVIQALKAYFKFEGLDSEAEKLKTPKMPKTLPKSLTEEEVRRIINAAETL
RDRLILLLLYGAGLRVSELCNLRVEDVNFEYGVIVVRGGKGGKDRVVPISESLLSEIKRY
LESRNDDSPYLFVEMKRKRKDKLSPKTVWRLVKKYGRKAGVELTPHQLRHSFATHMLERG
IDIRIIQELLGHSNLSTTQIYTKVSTKHLKEAVKKAKLVESIIGGS
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
gtggaggagagggaggagagagtgagggatgatacaattgaagagtttgcaacctatcta
gagcttgaggggaagagcaggaacaccgttaggatgtacacctactatatctctaaattt
tttgaagagggtcactctccaactgctcgagatgccctgaggtttcttgccaagttgaag
aggaagggatattctactagaagcctaaacttagtgattcaggcgttgaaggcgtacttt
aaattcgaaggtcttgattccgaagccgagaagttaaaaaccccaaagatgccgaagacc
ctaccaaagagcttgaccgaggaggaagtaagaaggataatcaacgctgcagagaccctt
cgggacaggcttatccttctcctcctctacggcgctggattaagggtttcggagctctgt
aaccttagagttgaggatgtgaacttcgaatatggggttatagttgtgagaggaggaaag
ggtggaaaagatagggtagttcctatctccgaatcgctgctctcggaaataaagaggtac
ctagagtcgagaaacgatgatagcccatacctattcgtggagatgaagaggaagaggaag
gacaaactttcccctaagacagtttggaggcttgttaagaaatacgggaggaaggctggg
gttgagttgacccctcatcaactcaggcatagcttcgctactcacatgctcgagaggggg
atagacataaggataattcaagagctcctgggtcactctaacctctcgacgacccaaatc
tatacgaaggtctccactaaacatctgaaggaagccgttaaaaaggcaaaactagttgag
agcatcatcgggggttcctaa
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