Pyrococcus abyssi: PAB0459
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Entry
PAB0459 CDS
T00024
Symbol
nth
Name
(GenBank) nth endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
pab
Pyrococcus abyssi
Pathway
pab03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PAB0459 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pab03400
]
PAB0459 (nth)
Enzymes [BR:
pab01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
PAB0459 (nth)
DNA repair and recombination proteins [BR:
pab03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PAB0459 (nth)
Prokaryotic type
PAB0459 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
HHH_2
HHH_5
EndIII_4Fe-2S
RecR_HhH
ECM11
DUF2400
Motif
Other DBs
NCBI-ProteinID:
CAB49586
UniProt:
Q9V0W6
LinkDB
All DBs
Position
627486..628154
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AA seq
222 aa
AA seq
DB search
MGKSSSLSERERALKIVQILKSTYPRERHVSGDPYKTLIRCIISQRNRDEVTDRVSEELF
KRYPSIEAIASASVEEMQNFLRSLKVGLWRSKGKWIVETSRIILEKYKGRVPDKFEELIK
LPGIGRKCANIVLAYGFGIPAIPVDTHVYRISRRLGLAPWDASPEEVEERLKELIPREEW
IYVNHAMVDHGKSVCRPIKPRCDECPLKELCPRIGVQANSNQ
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atggggaaaagctcaagcttatcagagcgtgagagggcccttaaaatagtccagatttta
aaatccacgtatcccagggagaggcacgtatctggggatccgtataaaacgctgataagg
tgcataatctctcagaggaacagggatgaggtcacggatagggtttccgaggagctgttc
aagaggtaccctagcatagaggcaatagcaagtgccagcgttgaggagatgcagaacttc
ctgaggagcttaaaggttgggttgtggaggagcaagggcaaatggatcgttgagacctcc
aggataatcttggagaaatataagggcagggttccggataagttcgaggagctgataaag
cttcctgggatagggaggaagtgcgcgaacatagttctagcttacggtttcggaattcca
gcaattcctgtggatacccacgtttacaggatctctaggagactcggtttagccccatgg
gatgcttcccccgaagaggttgaagagaggctgaaggagttgatccccagggaggagtgg
atctacgtaaatcatgccatggtcgatcatggaaaaagcgtgtgcaggccgataaagcct
agatgcgatgagtgcccattgaaggagctctgccccaggataggtgttcaagcaaactcg
aaccagtag
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