Pyrococcus abyssi: PAB0627
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Entry
PAB0627 CDS
T00024
Symbol
appA
Name
(GenBank) appA oligopeptide-binding protein appA precursor
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
pab
Pyrococcus abyssi
Pathway
pab02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pab00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PAB0627 (appA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pab02000
]
PAB0627 (appA)
Transporters [BR:
pab02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
PAB0627 (appA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
CAB49849
UniProt:
Q9V057
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Position
899975..901909
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AA seq
644 aa
AA seq
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MHTLEVQRMKKLVAAIVVGLFILSISAQHYVVAGEIQLPRNETLYVGGGLWSQPNNFNPT
VSWAAVTGTIGLIYETLFIYDPLKDKLEPWLAESGKWISDNTYRVVLKEGLTWQDGKPLT
AEDVKFTFDYAKEHKGLSYSPIWGWLKEVKVVDNRTVDFIFSEPHYEEWKYWLYNIAIIP
EHIWKNIDKPESFANTENPIGSGMYKLYKTDQMRFILVRNDKWWGIKYYGKPAPKYIVYV
IVYSNNLALSMLVKGDLDWSNFFIPGVPDVKAKYGIVTWYDKQPYHLPINTAFLFLNTQK
PPLNNPMFRRAIAYAINPKEIAARASQNQVKPADPTGLLIDYPVFKKIYYPEAVKKYGFT
YDPAKANEILDQLGYKDINGDGYRETPDGKPLKFTIEVPYGWTDWMEMARVISEQLQMVG
IRVDPKFPDYGKYWDDLTKGNFDMIINNFGSQVYATPWQWFNWVFYPDVAPIGKPTYSGN
WGRYKNERVAELLRLINTEKDENKKIQYYHELQEIFLKDLPYIPLIYNGAWFEASTQYWT
NWPTEHNPYALPITWQNYWQMGGLKVLLNIKPAKATTTSSPTTTPTKTTSSPTSTPTPTQ
TPSTSSPTATSTSPTETTTKGGICGPALLVGIAVVPILLRKRRK
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgcacacattggaggtgcaacgcatgaaaaaactagtggcagccatagttgttgggttg
ttcattttgagtatttctgctcaacactacgtggtggctggagaaattcaacttcctcgc
aacgaaaccctttatgttggcggtggcctttggagtcaaccaaataacttcaatcccacc
gtcagctgggcagccgttaccggaacgataggacttatatatgaaactttgttcatatat
gatccactcaaggacaaacttgaaccttggctagctgaaagtggtaaatggatatcggac
aatacgtatagggtggttctcaaagagggtctcacttggcaggatgggaaaccgctaaca
gcagaagacgtaaaatttacttttgactatgctaaggaacataaaggtctaagctattcc
ccgatttggggatggttaaaggaagtaaaggtcgttgacaataggacggttgatttcata
tttagcgaacctcattacgaggagtggaagtactggctttataatattgcaataatccca
gagcatatttggaagaacatagataaaccggagagctttgcaaataccgaaaatccaatt
ggctctggaatgtataagctttacaagactgatcaaatgagatttatccttgttaggaat
gataagtggtggggaataaagtactatggaaagccagctcccaagtacatagtctatgta
atagtctacagtaacaacttggccctatcaatgcttgttaagggggaccttgactggagc
aatttcttcatcccaggggttccagatgttaaagcaaaatacggcatagttacgtggtac
gacaagcaaccttatcacctcccaataaatacagcattcctgttcttgaacactcaaaaa
cctccacttaataatccgatgtttaggcgtgcaattgcatacgccataaacccgaaagag
atagctgcaagagcttcccaaaatcaagttaaaccagcggatccaacgggccttctaatc
gattatccagtctttaagaagatatactatccagaagcagttaagaagtatggctttaca
tacgatccagctaaggccaatgaaattctcgatcaacttggatacaaggacataaatggt
gatggatacagagaaactcccgatgggaaacctctaaagttcacaattgaagttccttat
ggttggacggactggatggagatggctagagtcataagtgaacagctccagatggtagga
attagggtagatccaaagttcccagattacggcaaatactgggatgacttaactaagggc
aactttgacatgataataaacaacttcggaagccaggtttatgcaactccttggcagtgg
ttcaactgggttttctatccagatgtagctccaattggcaagccaacgtattcaggaaac
tggggtagatacaagaacgagcgtgttgccgaacttttaagactcataaatactgaaaag
gacgagaacaagaaaatccaatactaccacgaactccaagagatcttccttaaggatctg
ccatacataccgttgatatataacggagcatggtttgaggcgagcactcaatactggact
aactggccgacagaacacaacccatacgcgttgccgataacttggcagaactactggcag
atgggtgggcttaaagtactgctcaacataaaacctgcaaaggccactacaacgtcctct
ccaactacgaccccaacgaagacgacatcatctccaacctctactccaacccccacccaa
acaccttcaacttcatctccaaccgcaacaagtacctctccaactgaaactacaaccaag
ggaggaatatgtgggccagcgttgctcgttggaattgcagtagtcccaatacttttaagg
aaacgccgtaaataa
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