Pyrococcus abyssi: PAB0755
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Entry
PAB0755 CDS
T00024
Symbol
infB
Name
(GenBank) infB intein containing translation initiation factor aIF-2
KO
K03243
translation initiation factor 5B
Organism
pab
Pyrococcus abyssi
Brite
KEGG Orthology (KO) [BR:
pab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
pab03012
]
PAB0755 (infB)
Translation factors [BR:
pab03012
]
Eukaryotic type
Initiation factors
eIF-5
PAB0755 (infB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP_EFTU_D4
Intein_splicing
IF-2
GTP_EFTU_D2
MMR_HSR1
LAGLIDADG_3
ATP_bind_1
Motif
Other DBs
NCBI-ProteinID:
CAB50050
UniProt:
Q9UZK7
Structure
PDB
LinkDB
All DBs
Position
1087047..1090025
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AA seq
992 aa
AA seq
DB search
MTKRIRQPIIAVLGHVDHGKCLLPDEKVVVPSVGFVTLKELFETASKVVERDDEKEIREL
DERITSVNGDGKTGLVKASYVWKVRHKGKVIRVKLKNWHGVTVTPEHPFLTTKGWKRADQ
LRPGDYVAVPRFIHGNEDEKIFLSYVKVKKSGEEWKEYFYLAGRKGNIDVNLLFVAPKRY
VVEFLRGYFEERSEVKGESVIVEARELVEPLSLALLRFGIFSKIQGSKLIVTGKRNLEAF
KDYIGFKDEREKALEEAIEKVKGSEVYPIFEEIRRLRLLFGFTREELGSYAKYENSEAPT
YEELMEILDFIERGSPSLSKKIAILEGKLKAELRVLEEEGLIKDGKLTPLGRELLEVWRN
REFDSKDVDYIRNIAETLVFIPVENVEEEEYDGYVYDLTTETHNFIANGILVHNTTLLDR
IRKTNVAAKEAGGITQHIGATEVPIEVVKKIAGPLIKLWKAEIKLPGLLFIDTPGHEAFT
SLRARGGSLADLAVLVVDINEGFQPQTIESIEILRKYRTPFVVAANKIDRIKGWVIEEDE
PFLMNIKKQDQRAVQELETKLWELIGKFYEFGFQANRFDRVQNFTRELAIVPISAKYGIG
IAELLVLIAGLSQRYLEEKLKIEVEGPARGTILEVREEPGLGHTIDVIIYDGTLHKDDTI
VVGGKDKAIVTKIRALLKPKPLDEIRDPRFRFDYVDEVTAAAGVKIAAPGLEEALAGSPV
IAAPTPEDVEKAKQEILEQIERVVISTDKVGVIVKADTLGSLEALSKELQEKEIPIRKAD
VGNVSKTDVMEALSVKEEEPKYGVILGFNVKVNEDAEEVAKAKDVKIFVGNVIYKLIEDY
EEWVKEEEEKKKRELLSKVTFPGVIRLYPDERYVFRRSNPAIVGIEVIEGRIKPGVTLIK
QNGQKVGVIRSIKSRDEFLQEAKKGQAVAIAIEGAIVGRHIHPGETLYVDLSRDDAITLL
KHLRDTLEDTDIKALKMIAKVKAKEDPFWRAI
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagagaattaggcaaccaatcatagcggttctcggtcacgttgatcacggcaaa
tgcctacttccagatgagaaggttgtagttccaagcgttggttttgtaacattaaaagag
ctcttcgagaccgctagcaaagtcgttgagagggacgatgagaaggagataagggagtta
gacgagagaattacaagcgttaatggagatggcaagacgggccttgtgaaagcctcctac
gtctggaaggttaggcacaaggggaaggtcatcagggttaagctgaagaactggcacggc
gtaacggtaacgccagagcatccatttctaactactaaaggctggaaaagagcagatcag
ttaaggccgggcgactatgtagctgttccaaggttcatacatggaaacgaggatgaaaaa
attttcctgtcctacgttaaggttaaaaagtcgggggaggagtggaaggagtacttctac
ttggctgggagaaaagggaatatcgatgtcaacttgctctttgtagcaccgaaaaggtac
gtggtcgagtttctcagggggtatttcgaggagagatctgaagttaaaggagaatctgtt
atagttgaggcgagggaattggttgaacccctatccttagccctcctccggtttggaata
ttttcaaaaatacagggaagcaaactcatcgtgaccgggaagaggaacttggaggctttc
aaggattacatagggttcaaagacgagagagagaaagcgctagaggaagccattgaaaag
gtcaagggtagcgaggtttacccgatatttgaggagattaggaggttgaggctcctcttt
ggcttcacaagggaagagctcggaagctatgctaaatacgagaatagtgaagcaccgaca
tatgaggagctcatggaaattttagatttcatagagaggggttccccaagcttaagtaag
aagatagcgatactagagggtaagctaaaagctgagctaagggtgctagaggaagagggt
ttaataaaggacggaaagctaaccccgcttggaagggaactcttggaggtttggcgcaac
agggagttcgattccaaggatgtggattacattagaaatatagccgaaactttagttttc
atcccagttgaaaatgtcgaggaagaggagtacgatggctacgtctacgatttaacaacg
gaaacacacaacttcatcgccaacggaatactcgtccacaacacaactttactcgatagg
ataaggaagaccaatgtggctgcgaaggaggccggcgggataacccagcacataggggct
acagaagttccgatagaagtggttaagaagatagccgggcctttgataaagctttggaag
gccgagataaagctccctgggctactcttcatagacaccccagggcatgaggctttcaca
agcttgagggccaggggaggtagcttagccgacctagcggttttagtcgttgatataaac
gagggattccagccacagacgatagagagcatagagatactgaggaagtacaggacaccc
ttcgtagttgctgcaaacaagatagacaggataaagggatgggtcatagaggaggatgag
cccttcctcatgaacataaagaagcaagatcagagggctgtccaggagttagagaccaag
ctttgggaacttattggaaagttctacgagtttggatttcaagctaaccgcttcgacagg
gttcagaactttacgagggagttagcaatagttccaatatccgcgaagtacgggatcggg
atagccgagttactcgttctcatagctggacttagtcagagatatctggaggagaagcta
aagatagaggttgaaggcccggcgaggggaacgatattagaggttagggaagagcccgga
ctcgggcatacgatagatgtgataatttacgatggaacactacacaaggacgacactatc
gtcgtcggtgggaaggataaggccatagtgaccaagataagggcactactaaagccgaag
cccctcgacgagataagggatccaaggtttagattcgactacgttgatgaagtaacagcg
gcggccggagtaaagatagccgctccaggacttgaggaggctctggcgggttcgccggtt
atagcagccccaacccccgaagatgtggagaaggctaaacaggaaatattagagcagata
gagagggtcgtcataagcaccgacaaggttggagtgatagtgaaggcagataccctcggt
agccttgaagccctaagcaaggagctccaggaaaaggagataccaataaggaaggccgac
gttggaaacgtaagtaaaacggatgtcatggaggcccttagtgtgaaggaagaggaacca
aagtacggtgtcatcttggggttcaacgtgaaagtaaacgaagatgcagaggaagttgca
aaggcgaaagacgttaagatattcgttggtaacgttatctacaagttaatagaagattac
gaagagtgggtcaaggaggaagaggagaagaagaagagggaactgctcagcaaagtgacg
ttccctggggttataaggctgtatccagatgaaaggtacgtcttcaggaggagcaacccg
gcgatagtggggatagaggtcattgagggaaggataaagcctggtgtgactttaattaag
cagaacggtcagaaggttggcgtgataaggtcaataaagagcagagacgagtttttgcaa
gaggctaagaagggacaagctgtggctatagcgatagagggtgccatagtcggaagacat
atccaccctggagaaaccctctatgtcgatctcagtagggatgatgcgataacgctactg
aagcatctgagagatacccttgaagataccgacatcaaggctttgaagatgattgcaaag
gtcaaggcaaaggaagaccccttctggagggcaatttga
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