KEGG   Polycladomyces abyssicola: JIR001_29930
Entry
JIR001_29930      CDS       T07192                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K02240  competence protein ComFA
Organism
pabs  Polycladomyces abyssicola
Brite
KEGG Orthology (KO) [BR:pabs00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pabs02044]
    JIR001_29930
Secretion system [BR:pabs02044]
 Type II secretion system
  Competence-related DNA transformation transporter (DNA-T) core components
   JIR001_29930
SSDB
Motif
Pfam: Helicase_C DEAD ResIII Flavi_DEAD AAA_22 AAA_18 AAA_30 AAA_25 DUF3638 AAA_19 MEDS
Other DBs
NCBI-ProteinID: BCU83210
UniProt: A0A8D5UH81
LinkDB
Position
complement(2989938..2991638)
AA seq 566 aa
MFTLYQVTMRGEHPHWGISLAPEVDERFWRNQGREFRITGWFETIGQAWCVLRKHAPEVS
SPIGKGMAYFEQTADDDGLSAGRNYGMAIWNILGGRVLLGEEIRSLLRFRWGEDPDPVAL
RMGLQWLCLMGVAEYMPAVEITGPAVKWRCSRCGSGPSRLFQTDCKRCRQTCASCDHCLV
LGRCRSCVPLFRIRPPEARTDHSNGVRLYLPQLTPKQQEVASVLESWRDRPERTLLLWAV
TGAGKTEVCLPLVRRTLQSGHRVLWVTPRRDVVDELYPRLKKAVEGVRVTAVHGGTRSTW
ADGELVIATAHQTWRMYRRFALAIIDEGDAFPLYGDPALQSGVDQALYKDGKVVWVTATP
PMVWQRKARRGELPVITLPARFHGHPLPAPERCVVRDLWNKVNHSRPVPPLSDFLRRLME
TGKQGLIFVPRVSDLPCLLRWITRKFPDMTRFCAAVSGKERNRREIVERFRRGRVRVLIA
TTVLERGVTVPGCQVLVLGADHTVMDTATLVQISGRAGRSPEDPEGIVRWISEEWTEAQR
RAIREIKKMNRLAYQAGCLHASGVKR
NT seq 1701 nt   +upstreamnt  +downstreamnt
atgtttacgctatatcaggtgacgatgagaggagaacaccctcattgggggatcagtttg
gctcctgaagtggacgagcggttttggcggaatcaggggagggagttccgcataaccggt
tggtttgaaacgattggacaagcttggtgtgttttacggaaacatgctccagaagtatcg
tcgccgatcgggaaagggatggcgtacttcgaacaaacggccgatgatgatggtctgtcg
gcaggacggaattacggaatggcgatatggaatatattgggtggtcgtgtgctgttgggg
gaggaaattcgatcgttattgcgatttcggtggggtgaggatcccgatccggtggctctg
cgtatgggtttgcagtggttatgtctgatgggggtggcagaatacatgcccgctgtcgaa
atcaccggtcccgcggtgaagtggcgttgcagccgctgtggcagtggaccgtctcggtta
tttcagacggactgtaaacggtgccgtcaaacatgtgcctcctgcgatcactgtctcgta
ttgggcagatgtcggtcatgcgttccgttgtttcgcatccggccacccgaggcgcgtacg
gatcactccaatggggttcgcctctatctgcctcaactgacgcccaaacaacaagaagtt
gcatcagtactggaaagctggcgcgatagaccggaacggacactgttgttgtgggcggtg
acgggagctggcaagacggaggtttgtttgccgttggttcgccggacactgcaaagcggg
catcgggtgctgtgggtgacaccacgacgcgatgtggtggacgagttgtatccgcgtttg
aaaaaggcagtggaaggcgttcgggtaacggccgttcatgggggaacgcgatcgacatgg
gcagacggagaactcgtgatcgctacggctcaccaaacctggcggatgtaccgccggttt
gctctggcgatcattgacgaaggggatgcttttccattgtatggggatcccgcattgcaa
tcgggggttgatcaagccttatataaggacgggaaagtagtgtgggtgacggccactccg
ccgatggtctggcagaggaaagcacggcggggcgaattgcccgttattaccctgcccgcc
cgatttcacggacatccgttacccgcacccgaacgatgcgttgttcgggatttgtggaat
aaggtgaatcacagcagacctgttccgccattgtccgattttttgcgtcgcctgatggag
actggcaaacaagggttgatttttgtgccacgggtgtcggatttaccgtgtctgttgcgg
tggatcacccggaaattccctgatatgacccggttctgtgctgctgtgtccggaaaagaa
cgcaacagaagggagatcgtggagcggtttcgccggggcagggttcgtgtgttgatcgcc
acgaccgtcttagagcgaggtgtgacggtgcccggctgtcaagtgttggtgttgggtgcg
gaccataccgttatggacaccgccactttggttcagatatcgggtcgggcagggcggtca
ccggaagatccggaagggatcgtccgttggatctcagaggaatggacggaagcacagcgt
cgggcgattcgggaaatcaagaagatgaaccgattggcgtaccaggcggggtgtctgcat
gcgtccggagtgaagcgatga

DBGET integrated database retrieval system