Salipiger abyssi: Ga0080574_TMP1516
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Entry
Ga0080574_TMP1516 CDS
T04681
Name
(GenBank) 23S rRNA pseudouridine955/2504/2580 synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
paby
Salipiger abyssi
Brite
KEGG Orthology (KO) [BR:
paby00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
paby03009
]
Ga0080574_TMP1516
Enzymes [BR:
paby01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
Ga0080574_TMP1516
Ribosome biogenesis [BR:
paby03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Ga0080574_TMP1516
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
APZ51850
UniProt:
A0A1P8UR09
LinkDB
All DBs
Position
846234..847280
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AA seq
348 aa
AA seq
DB search
MSGVQTITVGPGDGDQRLDRWLKRLFPHLQQGRIEKMCRKGELRIDGARAKASTRLATGQ
QVRIPPLPEPDEKPAAAPKPRVSEADAKLIQSCVLWKDDHIIALNKPPGLPSQGGSKQTR
HVDGLAEALRFGFDEKPRLVHRLDKDTSGVLLLARTREMAQALTAAIRHRRTRKIYWALV
AGVPTPYLGEIRYGLVKAAGHGRHGEGEKMICVHPRDMNATPGAQRAHTLYATLYRVAGR
ASWVALEPITGRTHQLRAHMAEIGHPIIGDGKYGGSGQENLGDGWGAQLGGIISKKLHLH
ARSISFEHPVTRKPVTITAPLPEHMAHSWETLGWAEDIAADDPFEELH
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcgtacagaccatcaccgtcggtcccggcgacggcgaccagcgcctcgaccgc
tggctcaagcggctcttcccgcatctccagcaggggcgcatcgaaaagatgtgccgcaag
ggcgagctgcgcatcgacggcgcccgcgccaaggcctcgacccggctcgcgaccggccag
caggtgcgcatcccgccgctgccggagcccgatgagaaacccgctgccgcgccgaagccc
agggtctcggaggccgacgccaaactcatccagtcctgcgtactgtggaaggacgaccac
atcattgcgctgaacaagccgccgggcctgccgagccagggcggcagcaagcagacgcgc
catgtggacgggctcgccgaggcgctgagattcggcttcgacgaaaagccgcgcctcgtg
caccggctcgacaaggacacctcgggcgtgctgctgctggcgcgcacccgcgagatggca
caggcgctcaccgccgcgatccgccaccgccgcacgcgcaagatctactgggcgctggtc
gccggcgtgccgaccccttatctgggcgagatccgttacgggctggtcaaggccgccggg
cacgggcgccatggcgagggcgaaaagatgatctgcgtgcatccgcgcgacatgaacgcg
acccccggcgcgcagcgggcgcatacgctctacgccacgctctaccgcgtcgccgggcgc
gcttcctgggtggcgctggaaccgatcaccgggcgcacccaccagctgcgcgcgcatatg
gccgagatcggccacccgatcatcggcgacggcaaatacggcggctcggggcaggaaaat
ctcggcgacggctggggcgcgcagcttggcgggatcatctcgaaaaagctgcacctgcac
gcacgctcgatcagcttcgagcatccggtgacaaggaagcccgtcacgatcaccgccccc
ctgcccgagcatatggcccatagctgggaaacgctgggctgggccgaggatatcgccgcc
gacgacccgttcgaggagctgcactga
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