Pectobacterium actinidiae: M9782_20165
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Entry
M9782_20165 CDS
T08879
Name
(GenBank) rhamnogalacturonan lyase
KO
K18197
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
pacb
Pectobacterium actinidiae
Brite
KEGG Orthology (KO) [BR:
pacb00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
M9782_20165
Enzymes [BR:
pacb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
M9782_20165
BRITE hierarchy
Motif
Pfam:
RGL11_C
RGI_lyase
FG-GAP_3
FG-GAP
PQQ
Adeno_IVa2
Motif
Other DBs
NCBI-ProteinID:
WEF13877
LinkDB
All DBs
Position
complement(4585856..4587679)
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AA seq
607 aa
AA seq
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MTSAYAAGKSKQIELLDRGLFAFKSSKHVFLSWRLFATDPENIAFNIYRDGQRINTSPLS
TSTNFIDPNGKADSVYSIRPVINGVEGVAEVAKSVLSGKRYQSIPLNKPADGVTPNGDAY
SYGVNDGSVGDLDGDREYEYVIKWAPSNSKDNAHSGYTGNVYIDAYKQDGTRLWRIDLGK
NIRSGPHYNDFIVYDLDGDGKAEVMMKTADGTVDGAGKVIGNSQADYRNTNGRVLTGPEY
LTVFNGQTGKAMATTDYLPERGDVCAWGDCYGNRVDRFLAGVAYLDGERPSAVFSRGYYG
RAVVVAWDWRDGKLTQRWTYDSGTSGDTLNTAYGQGAHHFRTGDADGDGKDDIIFGAATI
GSNGKLLNSTGLGHGDALHFGVLDPSREGKQVFMVHEGAKQYGDNAMEMHDAATGEILWG
YSNGSGGDNGRGVCMDIDPAHLGVECWSSQGGLFNAKGEKISDKKPSHINFGIWWDGDLL
RETWDRSVIDKWLPAKPGSTRLFSAYTYNSGTWINGTKATPVLSADLFGDWREEFIIPKS
DSSELQIFSTTSETAYRMPTLMHDPAYRTQVAAQNAGYNQPPHTSFYLGDGMTLPVKWES
VYTAPKK
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcagcttatgcggcaggaaaaagtaagcagattgaattgctggatcgtggtcta
tttgcattcaaatcatcgaaacatgtttttttgagctggcggctgtttgccaccgatcct
gaaaatattgcctttaatatttatcgtgatggtcagcgcattaatacttctccactgagc
accagtaccaatttcattgatcctaatggcaaagccgattccgtttattcgatacgtccc
gttattaatggcgttgaaggcgtggctgaggtcgctaaaagtgtattgagtggcaagcgt
tatcaatcgattcctttaaataaacctgctgatggggttacgcctaatggtgatgcctat
tcctatggtgtgaatgatggctcggttggcgatctggacggtgatcgagaatatgagtat
gtgatcaagtgggcgccgagtaactcgaaagataatgcgcattctggctacaccggcaat
gtgtatatcgatgcctataaacaggatggaacgcgactgtggcgtattgatttagggaaa
aacatccggtctgggccacattacaacgacttcatcgtgtatgacctggatggcgatggc
aaggccgaagtgatgatgaaaaccgccgatggcaccgtggatggtgcaggaaaggtcatt
ggcaatagccaggcggattaccgtaatactaatggtcgtgttctcaccgggcctgagtac
ctgacggtgtttaatggtcaaacagggaaagcgatggcaaccacagattatctccccgaa
cgcggcgatgtgtgcgcttggggggattgctatggcaaccgtgttgaccgttttctggca
ggggtcgcctatcttgatggcgagcgccctagcgcggtgttctcacgcggttattatggt
cgggccgtggtggtggcatgggactggcgtgatggcaagctgacgcagcgctggacgtat
gacagcggaacgtcgggtgataccttgaacaccgcctatggccaaggtgcgcaccatttc
cgcactggcgatgctgatggtgatggaaaagacgacattatctttggtgccgcaacgatt
ggtagcaacggtaagttattgaattcgacaggcctgggccatggtgacgcgctgcatttt
ggtgtactggatccttcgcgtgaaggtaaacaagtcttcatggtgcatgagggtgcgaaa
caatatggcgataacgcgatggaaatgcatgatgcggctacgggcgagatcctctgggga
tacagtaacggttcgggtggcgataacggacgtggcgtctgtatggatatcgatcctgcc
cacctaggggtggaatgctggtcttcacagggtgggctgttcaacgcgaaaggcgaaaag
atctccgataagaaaccatcacatatcaattttggtatctggtgggatggcgacctgctg
cgtgaaacatgggatcgttcggtgattgataagtggctaccagccaaaccgggctcgact
cggctattcagtgcttatacctacaattcagggacgtggataaacgggacgaaagcgaca
cccgtcctgagtgctgacctgtttggtgactggcgcgaagagtttattattcctaaatct
gatagcagcgaactccagattttcagcaccacgtcagaaaccgcataccgtatgccaacc
ttgatgcacgatccggcctatcggacacaggttgcggctcagaatgcaggctataaccaa
ccaccacacaccagcttttaccttggcgatgggatgacgctccctgtgaaatgggaaagt
gtctataccgcaccgaagaagtaa
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