Propionibacterium acidifaciens: EGX94_00555
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Entry
EGX94_00555 CDS
T05713
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
pacd
Propionibacterium acidifaciens
Pathway
pacd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pacd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EGX94_00555 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pacd03400
]
EGX94_00555 (recD)
Enzymes [BR:
pacd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
EGX94_00555 (recD)
DNA repair and recombination proteins [BR:
pacd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EGX94_00555 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
RecD_N
UvrD-helicase
AAA_22
Helicase_RecD
SH3_13
AAA_16
nSTAND3
FtsK_SpoIIIE
NTPase_1
MeaB
AAA_28
DEAD
SLFN-g3_helicase
TrwB_AAD_bind
AAA
AAA_24
AAA_7
Motif
Other DBs
NCBI-ProteinID:
AYW76776
UniProt:
A0A3G5HRK5
LinkDB
All DBs
Position
129661..131526
Genome browser
AA seq
621 aa
AA seq
DB search
MSGVTGRVVSAQGVLARFNEAGILEAPDVHTAQLVARTAGEHDPAVLLGAALTMRALRAG
SVCLPIRRVRRLAQFFVRDDDAQAGLAPQLDELGWPDPDRWLAALAASSLVGDEHSGPNE
HPLRLVDEALYLERYWHDEESITAALLGRCGPFPDVDEARLERSLAASPAAADRRDEAQR
TAVRTAVRARTAVICGGPGTGKTTTISRVVAALADQAEARGVPMRIALAAPTGKAAARLT
ESLDEHAVGPGVGAATTLHRLLGARPDRAPRHGAGHRLPFDAVVVDEMSMVSLPLMARLL
EALGPDTRLVMVGDPDQLTPVDAGAVLADITAAGLPGPEPGRSAVVVLDHGYRFTSGISD
VARAIRDGDADRTLELLATTEAVEFHDQDAADLDLEASLGLRDALVRQARATERAARLGR
AEEAIEALGAHRLLCAHRTGPYGVTTWGAAVERLQRAAAGQLSGDEWYSGRPLLATRNLP
ELGISNGDTGVVIATGRGRRAAMSNHRTYPAYALEGVETMYAMTVHKSQGSQFERVTLVL
PPPGSPLLTRGLLYTAVTRARTGVRIIGPASSVRAAVTTEAQRASGLTERLGRALDRPPG
APRGRPLRAREGAGARPAMPR
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcgtcaccggccgcgtcgtctcggcgcagggcgtgctcgcccgattcaacgag
gcgggcatcctcgaggcgcccgacgtccacaccgcccagctcgtcgcccgcaccgcgggc
gagcacgacccggcggtgctgctcggcgccgcgctcacgatgcgcgcgctgcgtgccggc
tcggtctgcctgccgatccgccgggtccgtcgactggcccagttcttcgtccgcgacgac
gacgcccaggcgggcctcgccccgcagctcgacgagctcggctggccggatcccgaccgg
tggctggcggcactggccgcctcgtcgctcgtgggagacgagcactccgggcccaacgag
catccgctccgcctcgtcgacgaggccctctacctcgagcgctactggcacgacgaggag
tcgatcaccgcggccctgctcgggcgctgcggcccgttccccgacgtcgacgaggcacgg
ctcgaacggagcctggccgcatcgcccgccgcggccgaccggcgcgacgaggcgcagcgc
accgccgtgcgcacggcggtgcgggcacgcacggccgtcatctgcggcggcccgggcacg
ggcaagacgacgacgatctcccgcgtcgtcgccgcgctcgccgaccaggcggaggcccgg
ggcgtcccgatgcgcatcgcgctcgccgcgccgaccggcaaggccgccgcccggctgacc
gagtcgctcgacgagcacgccgtcgggcccggcgtcggcgcggcgacgacgctgcaccgc
ctgctcggggcccgccccgaccgggccccccgccacggggccgggcaccggctgccgttc
gacgccgtggtcgtcgacgagatgtcgatggtctccctgccgctcatggcccgcctgctc
gaggcgctcggccccgacacgcgcctggtcatggtgggcgaccccgaccagctcaccccg
gtcgacgccggggccgtgctcgccgacatcaccgccgccgggttgcccggcccggagccg
ggccggtcggccgtcgtcgtcctcgaccacggctaccgcttcacgagcggcatctccgac
gtcgcccgggcgatccgcgacggcgacgcggaccgcaccctggagctgctggccaccacc
gaggccgtcgagttccacgaccaggacgccgccgacctcgatctggaggcctcgctgggg
ctgcgcgacgccctggtgcgtcaggcccgcgccaccgagcgggccgcccggctgggcagg
gccgaggaggccatcgaggcgctcggcgcccaccgcctgctgtgcgcacaccgcaccggc
ccctacggggtcaccacctggggcgccgccgtcgagcgcctccagcgcgccgcggccggc
cagctctccggcgacgagtggtacagcggacggccgctgctggccacccggaacctcccc
gagctgggcatcagcaacggcgacaccggcgtcgtcatcgccaccgggcggggccggcga
gccgcgatgagcaaccaccgcacctacccggcgtacgcgctggagggcgtcgagacgatg
tacgccatgacggtgcacaagtcgcagggcagccagttcgagcgggtcaccctcgtcctg
cccccgcccggctcgccgctgctcacgaggggcctgctctacacggccgtgaccagggcg
aggaccggtgtgcgcatcatcggcccggcgagctcggtgcgcgcggccgtcacgacggag
gcccagcgcgcctcggggctgaccgaacggctgggcagggccctcgaccgcccgccgggc
gcaccccgaggccgcccgctcagggctcgggaaggggcaggcgcccgtccagccatgcct
cgatga
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