Pigmentiphaga aceris: FXN63_22135
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Entry
FXN63_22135 CDS
T06198
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pacr
Pigmentiphaga aceris
Pathway
pacr02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pacr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FXN63_22135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pacr03021
]
FXN63_22135
Transcription machinery [BR:
pacr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FXN63_22135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
Sigma70_ECF
HTH_11
GerE
HTH_Mga
Phage_antitermQ
Motif
Other DBs
NCBI-ProteinID:
QEI08237
UniProt:
A0A5C0B6J1
LinkDB
All DBs
Position
complement(5134282..5134809)
Genome browser
AA seq
175 aa
AA seq
DB search
MMAKEYGVTPSVAVLYGDHHSWLQAWLRRRLGSAADAADLAQDAFVRLLTKPASRGFSSF
VEARVYLRTAANGLCIDLWRRREVEQAWLQTLATHPESYAPSPEHRAIVIETLLEIGDML
SRLSQKAATAFVMAQVDGMAYREIAEALSVSERMVQKYIAQAMLQCGLIDAGLQG
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
atgatggcaaaggaatacggcgtcacgccaagcgtagcggtgctctacggcgatcaccac
agttggttgcaggcatggttgcgtcgccgtctgggcagtgcggccgatgccgcagacctt
gcgcaagacgcgttcgtacgcctgctgaccaaaccggcgtcacgtggcttcagcagcttt
gtcgaggcgcgggtgtatttgcgcacagccgccaacgggctttgcatcgatctgtggcgt
cgccgcgaagtggagcaagcctggttgcagaccttggccacccaccctgagtcttacgcg
ccgtcacccgaacaccgcgcgatcgtcatcgaaactttgcttgaaatcggcgacatgctc
agccgcctgtcgcagaaagcggccactgcatttgtaatggcgcaggtcgatggcatggcg
tatcgcgagatcgctgaagccttgtcggtatccgagcgcatggtgcagaaatacattgcg
caagccatgctgcaatgcggattgatcgacgctggcctgcagggctag
DBGET
integrated database retrieval system
