Pygoscelis adeliae (Adelie penguin): 103924770
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Entry
103924770 CDS
T06012
Symbol
LIG4
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
padl
Pygoscelis adeliae (Adelie penguin)
Pathway
padl03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
padl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
103924770 (LIG4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
padl03400
]
103924770 (LIG4)
Enzymes [BR:
padl01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
103924770 (LIG4)
DNA repair and recombination proteins [BR:
padl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
103924770 (LIG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_IV
BRCT
DNA_ligase_A_C
BRCT_2
RNA_ligase
mRNA_cap_enzyme
DUF2948
SKA1
Motif
Other DBs
NCBI-GeneID:
103924770
NCBI-ProteinID:
XP_009331629
UniProt:
A0A093PBC9
LinkDB
All DBs
Position
Unknown
AA seq
911 aa
AA seq
DB search
MASAPASQPSEKTVASHVPFADLCSTLERIQTCKSRPEKTKYFKEFLDSWRKFHDALHQK
KKDVTDSFYPAMRLILPQLERERMAYGIKETMLAKLYIELLNLPKGGKDAAKLLNYRTPA
GSCGDAGDFAMVAYFVLKPRSPKQGRLTIEQVNDHLDAIANNNAAKNKGLLKKSLLQLIT
QSTALEQKWLIRMIIKDLKLGVSQQTIFSIFHPDAAELHNVTTDLEKVCRQLHDPSVSLS
DVSIMLFSAFKPMLAAIADVQQIEKQMNNQIFYIETKLDGERMQMHKDGDVYKYFSRNGF
DYTQQFGASPLDGSLTPFIHKVFKSNVQNCILDGEMMAYNPETQTFMQKGNRFDIKRMVE
DSDLQTCFCVFDVLMVNDQKLGHEVLSKRYEILSSVFTPVTGRIHVVRKTSARTRKEVID
ALNEAIDNREEGIMVKDPTSTYKPDKRGEGWLKIKPEYVSGLMDELDLLIVGGYWGKGSR
GGMMSHFLCAIAETPPPNEKPTVFHSICRVGSGYTMKELYDLGLKLAKHWKPYHRKDPPC
NILCGTEKPEMYIEPCNSVIVQIKAAEIVNSDMYKTDCTLRFPRIERIREDKEWFECMTS
DMLEDLRSKAEGKLASKHLHIDEYEEPQEKKRKTVSKVKKIIGIAEQFKAPDLSNVSKVS
NVFEDVEFCVMTGMGKYSKSELESRIAECGGSVVQNPGPETYCVIVGAENVRVKNIIASN
KYDVVRAEWLLQCFQTKMLVPWQPACMVHMSPDTKEHFAREYDCYGDSYTADTDVAQLKE
VFSRMKDNKVMPLDMIAALEERYSWNSCPLSIFRGNTVYVDCYAVVNEPGTKIHGTTLSI
RALELRFYGAKVVSHLEEGISHVVIGEDHSRVRGVKALRRTFGKKFKIVSELWVTESVEE
GVPKNENQYLI
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggcttccgcacctgcttcgcagccttctgaaaaaacagtggcctctcacgtccctttt
gcagatctgtgttctactctggagcgaatacagacgtgtaagtctcgcccggagaaaacc
aagtatttcaaggaattcctggattcctggagaaaattccatgatgcccttcatcaaaaa
aagaaagacgtcacggattctttttatccagctatgcggcttattcttccacagttggaa
agagaaaggatggcgtatggaattaaagaaactatgcttgcgaagctgtatattgaactg
cttaacttaccaaaaggtggcaaagacgctgccaagcttttaaattacaggacacctgct
ggctcatgtggagatgctggagattttgcaatggttgcgtactttgtgttaaaacccagg
agcccaaaacaaggcagactgacgatagaacaagtcaatgatcacttagatgcgatagct
aataataacgctgctaaaaacaagggtctgttaaagaaaagtcttcttcagttaattacc
cagagcacagcactggaacaaaaatggctcatccggatgattataaaggatctaaagctt
ggtgttagtcaacaaactatattttccatttttcatcctgacgctgctgaattgcacaac
gtcacaactgatttggaaaaagtgtgcaggcaactgcacgatccctctgtctccctcagt
gatgtttccatcatgttgttttctgcctttaaaccaatgcttgctgctattgctgacgtc
cagcaaattgagaaacaaatgaataaccaaatattctacatagaaactaagctggatggt
gaacgtatgcagatgcacaaagacggagatgtgtataaatatttttcccgaaatgggttc
gactatactcagcagttcggtgcttccccccttgacggttcattaaccccatttattcat
aaagtatttaagagcaacgtacaaaattgcattctggatggtgaaatgatggcttacaat
cctgagacgcaaacctttatgcaaaaaggaaacagatttgacatcaaaagaatggtggag
gactctgatctgcagacgtgcttctgtgtgttcgatgtattgatggttaacgatcagaag
ttgggtcacgaagtactaagcaaaagatacgaaatcttaagtagtgtatttaccccggta
acgggcaggatacatgttgtgcgtaaaacaagtgccagaacgagaaaagaagtgattgat
gctttaaatgaggcaatagataacagagaggaagggattatggtgaaagaccccacgtcc
acctacaagcccgacaaacgtggggaaggctggttaaaaatcaagccggaatacgtcagt
gggctgatggatgaactagaccttttaattgttggtggttactggggaaagggctcacgt
ggcggaatgatgtctcattttctgtgcgctattgcagagacgcctcctccaaatgaaaaa
cctaccgttttccactctatttgtcgtgttggctctggctataccatgaaggaattgtat
gatttaggtttgaaactggctaaacactggaagccctaccataggaaggacccgccctgt
aacattttgtgcggaactgaaaaacctgaaatgtacattgagccttgcaactctgtcata
gttcagatcaaggcagccgagattgttaacagtgacatgtacaagactgactgtactttg
agattcccccgaattgagaggataagagaggacaaagaatggttcgagtgcatgacttca
gacatgttagaagatctcagaagcaaagcggaagggaagctggcatctaagcaccttcat
atagatgagtatgaggagccacaagagaaaaaaaggaaaactgtgtcaaaggtgaagaag
ataatcgggatagctgagcaatttaaagctcccgatctttctaacgtaagcaaggtttca
aatgtatttgaagacgttgaattttgtgttatgacaggaatgggaaaatactcaaagtct
gaactggaaagcagaatagctgaatgcggtggcagcgtggtacagaacccggggccggag
acttactgtgtcattgtaggggctgagaacgtcagagtgaaaaacatcattgcttccaac
aaatacgatgtggtgagggcagagtggctccttcagtgttttcagaccaaaatgctggtg
ccttggcagccagcctgtatggttcacatgtctcctgacacaaaagaacattttgctcgt
gagtatgattgttacggagacagctacacagcagacacagatgttgcacaactcaaggaa
gtgttctcgagaatgaaggacaataaggtgatgccgttggacatgatcgcagcgttagaa
gaacgttactcgtggaacagttgtccgctcagtatattcagaggaaacactgtttacgtg
gactgttacgctgttgttaatgagcccggcaccaaaatccatggaacaacactatcaatt
agagctttggagctccgtttttatggtgcaaaagtagtctctcaccttgaagagggcatc
tcccatgttgttataggagaagatcattcccgggtaagaggggtgaaagcactcaggaga
acatttgggaaaaaatttaaaatcgtatctgagctgtgggtaacagagtccgtggaggaa
ggagtcccaaagaatgaaaatcagtacttaatttaa
DBGET
integrated database retrieval system
