Pseudomonas aeruginosa NCGM 1900: NCGM1900_4475
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Entry
NCGM1900_4475 CDS
T03789
Symbol
gnyA
Name
(GenBank) alpha subunit of geranoyl-CoA carboxylase
KO
K01968
3-methylcrotonyl-CoA carboxylase alpha subunit [EC:
6.4.1.4
]
Organism
paeb
Pseudomonas aeruginosa NCGM 1900
Pathway
paeb00280
Valine, leucine and isoleucine degradation
paeb01100
Metabolic pathways
Module
paeb_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
paeb00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
NCGM1900_4475 (gnyA)
Enzymes [BR:
paeb01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
NCGM1900_4475 (gnyA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
MCC_alpha_BT
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
ATP-grasp
Biotin_lipoyl_2
HlyD_3
GARS_A
HlyD_D23
ATP-grasp_3
ATPgrasp_ST
LAL_C2
ATP-grasp_4
Peptidase_M6
Motif
Other DBs
NCBI-ProteinID:
BAP23555
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All DBs
Position
4739334..4741301
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AA seq
655 aa
AA seq
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MNPDYRSIQRLLVANRGEIACRVMRSARALGIGSVAVHSDIDRHARHVAEADIAVDLGGA
KPADSYLRGDRIIAAALASGAQAIHPGYGFLSENADFARACEEAGLLFLGPPAAAIDAMG
SKSAAKALMEEAGVPLVPGYHGEAQDAETFRREAGRIGYPVLLKAAAGGGGKGMKVVEHE
AELAEALSSAQREAKAAFGDARMLVEKYLLKPRHVEIQVFADRHGHCLYLNERDCSIQRR
HQKVVEEAPAPGLGAELRRAMGEAAVRAAQAIGYVGAGTVEFLLDERGQFFFMEMNTRLQ
VEHPVTEAITGLDLVAWQIRVARGEALPLTQEQVPLNGHAIEVRLYAEDPEGGFLPASGR
LALYREAPAGPGRRVDSGVREGDEVSPFYDPMLAKLIAWGETREEARQRLLAMLAETSVG
GLRTNLAFLRRILGHPAFAAAELDTGFIARHQDDLLPAPQALPEHFWQAAADAWLQSEAG
YRRDDDPYSPWSRNDGWRSALARESDLMLRCRDERRCVRLRHASPSQYRLDGDDLVSRVD
GVTRRSAALRRGRQLFLEWEGELLAIEAVDPIAEAEAAHAHQGGLSAPMNGSIVRVLVEP
GQTVEAGATLVVLEAMKMEHSIRAPHAGVVKALYCSEGELVEEGTPLVELDENQA
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgaacccggactaccgcagcatccagcgcctcctggtcgccaaccgcggcgagatcgcc
tgccgggtgatgcgcagcgcgcgcgccctcggcatcggcagcgtcgccgtgcacagcgac
atcgaccgccacgcccgccacgtcgccgaagccgacatcgccgtcgacctgggcggcgcc
aagcccgccgacagctacctgcgcggcgacaggatcatcgccgccgccctcgccagcggc
gcccaggcgatccaccccggctacggcttcctctcggagaacgccgacttcgcccgcgcc
tgcgaggaagccggcctgctcttcctcggaccgccggcggcggccatcgacgccatgggc
agcaagtcggcggccaaggcgctgatggaagaagccggcgtgccgctggtgcccggctac
cacggcgaagcccaggatgccgagaccttccgccgggaagccggaaggatcggctacccg
gtgctgctcaaggccgccgctggcggcggcggcaagggcatgaaggtggtggagcacgag
gccgagctggccgaggccctttcctccgcccagcgcgaggccaaggccgccttcggcgac
gcgcggatgctggtggagaaatacctgctgaagccgcgccacgtggagatccaggtattc
gccgaccgccatggccactgcctgtacctcaacgaacgcgactgttcgatccagcgccgc
caccagaaggtcgtcgaggaagcccccgcccccggtctcggtgcggaactgcgccgggcc
atgggcgaggccgcggtacgcgcggcgcaggcgatcggctacgtcggcgccggtaccgtc
gaattcctcctcgacgaacgcggccagttcttcttcatggaaatgaacacccgcctgcag
gtggaacacccggtcaccgaggccatcaccggcctcgacctggtcgcctggcagatccgc
gtcgctcgcggcgaggcgctgccgctgacacaggaacaggtgccgctgaacggccacgcc
atcgaagtgcggctctacgcggaagaccccgagggcggcttcctccccgccagcggccgc
ctggcgctgtaccgcgaagcgcccgccggccccggccggcgggtcgacagcggggtacgc
gaaggcgacgaggtctcgccgttctacgacccgatgctggccaagctgatcgcctggggc
gaaacccgcgaggaagcccgccagcgcctgctggcgatgctggcggaaacctcggtcggc
ggcctgcgcaccaacctggcattcctccgccgcatcctcggccatccggcgttcgccgcc
gccgaactggacaccggtttcatcgcgcgccaccaagacgacctgctgccggcgccgcaa
gcgctgccggagcatttctggcaggccgccgccgatgcctggctgcagagcgaagcgggc
taccgtcgcgacgacgacccgtattcgccgtggagtcgcaacgacggctggcgcagcgcc
ctggcgcgggagtccgacctgatgctgcgctgccgcgacgaacgccgctgcgtccgcctg
cgccacgccagccccagccagtatcgcctggacggcgacgacctggtcagccgggtggac
ggtgtcacccgtcgctcggcggcgttgcgccgcggacgccagttgttcctcgaatgggag
ggcgaactgctggccatcgaagccgtcgacccgatcgccgaggccgaggccgcccatgcc
caccagggcggtttgagcgcgccgatgaacggcagtatcgtgcgggtcctggtcgagccc
ggccagacggtcgaagccggcgccaccctggtggtgctggaggcgatgaagatggagcac
agcatccgcgcgccccacgccggggtagtgaaggcgctgtattgcagcgagggcgaactg
gtcgaggaaggcacgccgctggtggagctggacgagaaccaggcctga
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