Paenibacillus sp. FSL H7-0737: H70737_05035
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Entry
H70737_05035 CDS
T03359
Name
(GenBank) DNA polymerase
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
paej
Paenibacillus sp. FSL H7-0737
Pathway
paej03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
paej00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
H70737_05035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paej03400
]
H70737_05035
Enzymes [BR:
paej01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
H70737_05035
DNA repair and recombination proteins [BR:
paej03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
H70737_05035
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigD_Prim-Pol
Motif
Other DBs
NCBI-ProteinID:
AIQ22268
UniProt:
A0A089IIA5
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All DBs
Position
complement(1141676..1142560)
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AA seq
294 aa
AA seq
DB search
MPAAIKGTITVDGQEITITNPEKLLWPDCGITKRIYLEKLAALSPYLLRYCRDRLLTVIR
YPHGISGMSFYQKNAPDPLPAFVQTAVHENINYIKLQGLPELIWLGNLAALEFHPSLHYV
GSELPCEWMIDLDPSREVEPRIMEATAIVGSVLTSLGLSSVPKTSGATGVQIIVPIETGV
TFDGLRKIGHFVGRYVTEKHPDLFTLERLKKNRGDKIYFDYLQHYSGKTLAAPYTPRARP
LATVSTPLLWKEVQQNVSPTDFHLLNIEERLQQMGDLLEKVPPQPVKQLIAKLP
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgccagcagccatcaaaggcacaattactgtagacggccaagagataaccatcaccaac
ccagagaagctgctatggccggattgcgggattacgaagcggatctatctggaaaagctc
gccgccctctctccctatctgctgcgttattgtcgagatcggctgctaaccgtaatacgt
tatccgcatggtatctctggaatgtccttttatcagaaaaatgcacctgatcctcttcca
gcttttgtccagaccgctgttcacgagaatattaactatatcaagctgcaaggtttacct
gagctgatctggctgggtaatctggctgctttggagttccatccttctttgcattatgta
ggtagcgagctgccttgtgaatggatgattgatctagacccgtcacgtgaggtcgagccc
cgtatcatggaagcaactgcaatcgtagggtcggtcctaacctcccttggtttatcctct
gtgcccaaaacctccggggctaccggggtgcagatcatcgtgcctatcgagactggcgtt
acttttgatggattgcgaaaaatcggacactttgtgggtcgttatgtcactgaaaagcac
cccgatttattcaccttggagcgtctgaagaagaatcggggagataaaatctattttgac
tacctccagcattacagtggcaaaaccttagctgcaccttacacaccacgtgccagaccg
cttgctacagtatccacaccattgctctggaaagaggttcagcaaaacgtatctcctact
gattttcatctgctcaatattgaggaacgcctgcaacagatgggagatcttttggaaaaa
gtgccaccgcagcccgtcaaacaactcattgctaagcttccatag
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