Pseudomonas aeruginosa PA1R: PA1R_gp2362
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Entry
PA1R_gp2362 CDS
T02929
Name
(GenBank) RNA polymerase sigma-54 factor RpoN
KO
K03092
RNA polymerase sigma-54 factor
Organism
paer
Pseudomonas aeruginosa PA1R
Pathway
paer02020
Two-component system
paer02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
paer00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PA1R_gp2362
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
PA1R_gp2362
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
paer03021
]
PA1R_gp2362
Transcription machinery [BR:
paer03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PA1R_gp2362
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
CCDC14
HTH_IclR
HTH_21
Motif
Other DBs
NCBI-ProteinID:
AHA24105
LinkDB
All DBs
Position
2639410..2640879
Genome browser
AA seq
489 aa
AA seq
DB search
MGQQLTMTPQLQQAIRLLQLSTLDLQQEIQEALESNPMLERQEDGDDFDNSDPLADGAEQ
AASAPQESPLQESATPSVESLDDDQWSERIPSELPVDTAWEDIYQTSASSLPSNDDDEWD
FTARTSSGESLHSHLLWQVNLAPMSDTDRMIAVTIIDSINNDGYLEESLEEILAAIDPEL
DVELDEVEVVLRRIQQLEPAGIGARNLRECLLLQLRQLPSTTPWLNEALRLVSDYLDLLG
GRDYSQLMRRMKLKEDELRQVIELIQCLHPRPGSQIESSEAEYIVPDVIVRKDNERWLVE
LNQEAMPRLRVNATYAGMVRRADSSADNTFMRNQLQEARWFIKSLQSRNETLMKVATQIV
EHQRGFLDYGEEAMKPLVLHDIAEAVGMHESTISRVTTQKYMHTPRGIFELKYFFSSHVS
TAEGGECSSTAIRAIIKKLVAAENAKKPLSDSKIAGLLEAQGIQVARRTVAKYRESLGIA
PSSERKRLV
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgggccagcagctgacgatgacgccgcagctgcaacaggccatacgcctcctccagcta
tccaccctggacctccagcaggaaatccaggaagcgctggaatccaatcccatgctcgaa
cgccaggaagacggcgacgatttcgacaacagcgaccctctcgccgatggcgccgaacag
gcggccagcgcgccccaggagagccctctccaggaaagcgccacgcccagcgtcgaaagc
ctcgacgacgaccagtggagcgaacgcatacccagcgagttgccggtggataccgcctgg
gaagacatctaccagaccagcgccagcagcctgcccagcaacgacgatgacgaatgggac
ttcaccgcgcgcaccagcagcggcgagagcctgcacagccacctgctctggcaggtcaac
ctggcaccgatgtcggacaccgatcggatgatcgcggtgaccatcatcgatagcatcaac
aacgatggctacctcgaagagtccctcgaggaaatcctcgccgccatcgatccggaactg
gacgtcgagctcgacgaagtggaagtcgtgctgcgccgcatccagcaactggaacccgcc
ggcatcggcgcccgcaacctgcgcgagtgcctgctgctgcaactgcgccagttgccgtcc
accacgccctggctgaacgaagcgctgcgcctggtatccgactacctcgacctgctcggc
ggccgcgactacagccaattgatgcggcgcatgaagctcaaggaagacgaactgcgccag
gtcatcgagctgatccagtgcctgcatccccggcccggttcgcagatcgaatcgagcgaa
gccgaatacatcgtccccgacgtcatcgtgcgcaaggacaacgagcgctggctggtcgag
ctgaaccaggaggcgatgccacgcctgcgcgtcaacgccacctacgccggcatggtccgc
cgcgccgacagcagcgccgacaataccttcatgcgcaaccagttgcaggaagcccgctgg
ttcatcaagagcctgcagagccgcaacgaaacgctgatgaaggtcgccacccagatcgtc
gagcaccagcgcggtttcctcgactacggcgaagaagccatgaagccgctggtcctgcac
gacatcgccgaagcggtgggcatgcacgaatcgaccatttcgcgggtcaccacgcagaaa
tacatgcatacgccgcgcggcattttcgagctgaaatatttcttttcaagtcacgtcagt
accgccgaaggcggggaatgctcgtccaccgcgatccgcgcgatcatcaagaaactggtg
gccgcggaaaatgcgaaaaagccattgagcgacagcaagatcgctggtttactggaggca
cagggcattcaagtggctcgccgcaccgtcgccaaataccgcgaatccctgggcatagcc
ccttcgagcgagcgcaagcgactggtgtga
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