Pasteurella aerogenes: NCTC13378_01683
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Entry
NCTC13378_01683 CDS
T05989
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
paet
Pasteurella aerogenes
Pathway
paet03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
paet00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC13378_01683 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paet03019
]
NCTC13378_01683 (rhlB)
Enzymes [BR:
paet01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NCTC13378_01683 (rhlB)
Messenger RNA biogenesis [BR:
paet03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NCTC13378_01683 (rhlB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
CMS1
SNF2-rel_dom
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
VEG72151
LinkDB
All DBs
Position
1:complement(1776623..1777900)
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AA seq
425 aa
AA seq
DB search
MQNNHLSQRRFADLPLHPTLLQALQQQGFEYCTPIQALSLPISLQGRDVAGQAQTGTGKT
MAFLTATFHHLLQNPSKAMSQPRALILAPTRELAVQIDHDAAIFAQASGLKTALAYGGDG
YEKQLKAIEQGVDILIGTTGRVIDYVKQGIIRLDHIQVVVLDEADRMFDLGFIKDIRYLL
RKCPPVQQRLTMLFSATLSYKVRELAFEDMNDPQYLEIEPLQKTGHHIKEELFYPSNQDK
MALLMTLLEEEWPQRCIVFANTKHRCEEIWGYLAADGNRVGLLTGDVAQKKRLSLLKQFT
DGALDILVATDVAARGLHIPDVSHVFNYDLPDDREDYVHRIGRTGRAGESGVSISFACEE
YAMNLPAIEEYIGHSIPVSQYDPNALLTDLPKPLRLKRAQPLNRTNAHNNRSTVRGNSRP
FKKRF
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaataatcatttaagtcagcgtcgttttgctgatttaccgttacaccctaccctc
ttacaagccttgcaacaacagggatttgaatactgtacgccaattcaagcgttgtctttg
cccataagtttgcaaggacgcgatgtggcaggacaggcacaaaccggaacaggaaaaacc
atggcatttttaaccgccactttccatcacttattacaaaatccgagtaaagcaatgtcc
caacctcgcgcgctgattttagcaccgacccgtgaattagcggtgcaaattgatcatgat
gctgccatttttgcgcaagccagtggcttgaaaaccgctttggcatatggcggcgacggt
tacgagaaacaattaaaagccattgagcaaggtgtggatattttgatcggtacgaccgga
cgggtgattgactatgtcaaacaagggattattcgcttggatcacattcaagtggtggta
ctggatgaagcagatcggatgtttgatctgggttttattaaagatattcgctatttattg
cgcaaatgtccgccggtacaacaacgtttgaccatgttattttccgccacgctgtcttac
aaagtgcgagagcttgcttttgaagatatgaatgatccgcaatatctggaaatcgaaccc
ttgcaaaaaaccggacaccatatcaaagaagaattattctatccgtccaaccaagacaaa
atggcattgttaatgaccttgctcgaagaagaatggccgcagcgttgtattgtgtttgcg
aatactaaacatcgttgtgaagaaatttggggttatttagcggcggacggaaatcgtgtc
ggtttgctcaccggcgatgtggcacagaaaaagcgcttaagcctgttgaaacaatttacc
gacggggcgttggatattttggtggcaacggatgtcgcagcgcgaggattgcatattccg
gatgtcagccatgtattcaattatgacttgccagacgatcgggaagattatgtgcatcgt
attggacgcactggacgagccggcgaaagcggtgtgtcgataagttttgcttgcgaagaa
tacgccatgaatttacccgcaattgaagaatatatcggccattccattcccgtcagtcaa
tatgatccgaatgccttgttaaccgatttgccaaaaccgttgcgcttaaaacgcgcgcaa
ccgttaaatcgcaccaatgcacataataaccgcagtactgtgcgcggcaattctcgccca
tttaaaaaacgtttctaa
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