Paracoccus aestuarii: JHW48_00055
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Entry
JHW48_00055 CDS
T08926
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
paex
Paracoccus aestuarii
Pathway
paex00521
Streptomycin biosynthesis
paex00523
Polyketide sugar unit biosynthesis
paex00541
O-Antigen nucleotide sugar biosynthesis
paex01100
Metabolic pathways
paex01110
Biosynthesis of secondary metabolites
paex01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
paex00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
JHW48_00055 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
JHW48_00055 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
JHW48_00055 (rfbC)
Enzymes [BR:
paex01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
JHW48_00055 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
WCR00559
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All DBs
Position
complement(11605..12159)
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AA seq
184 aa
AA seq
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MQIDPTPLPGVVVLTPARHGDDRGFFSESWNRRTLREAGLDLPDIVQDNHSMSMRAGTLR
GLHYPAPPHAQGKLVRCGRGSPFDVAVDARRGSPTYGQWFGTELSFADGRQLWIPAGFLH
GFVTRAPETEVIYKCTAHYDRAADGAVAWDSLGIDWGVRDPVLSEKDRAAPAFADGTSPF
ASDA
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atacagatcgaccccacccccttgcccggcgtcgttgtcctgacgcccgcccgccacggc
gacgaccgcggcttcttctcggaaagctggaatcgccgcacgctgcgcgaggcggggctg
gacctgccggatatcgtccaggacaaccattcgatgtcgatgcgcgcgggcacgctgcgg
gggctgcattacccggccccgccccatgcccaaggcaagctggtgcgctgcggccgcggc
agcccgttcgacgtggcggtggatgcccggcggggcagccccacctacgggcaatggttc
gggaccgagcttagtttcgccgatggccgccagctgtggatccccgcgggcttcctgcac
ggcttcgtcacccgcgccccggagaccgaggtgatctacaaatgcaccgcccattacgac
cgcgccgccgacggggcggtggcatgggacagcctgggcatcgattggggcgtccgcgat
ccggtcctgtcggaaaaggatcgcgccgcgcccgccttcgcggacgggaccagccccttt
gcgagtgacgcatga
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