Paracoccus aestuarii: JHW48_09560
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Entry
JHW48_09560 CDS
T08926
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
paex
Paracoccus aestuarii
Pathway
paex01501
beta-Lactam resistance
paex01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
paex00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JHW48_09560
01503 Cationic antimicrobial peptide (CAMP) resistance
JHW48_09560
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
paex02000
]
JHW48_09560
01504 Antimicrobial resistance genes [BR:
paex01504
]
JHW48_09560
Transporters [BR:
paex02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
JHW48_09560
Antimicrobial resistance genes [BR:
paex01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
JHW48_09560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
Motif
Other DBs
NCBI-ProteinID:
WCQ98199
LinkDB
All DBs
Position
1881333..1884398
Genome browser
AA seq
1021 aa
AA seq
DB search
MNIAAPFIKRPVGSSVLGMMIILLGILGLAGLETRQYPRVDETVITVTTVYPGASADLIQ
GFVTAPISSAVATAEGVDYVTSQSRPSASIVSVNMNLGEDPDTALTEVMSKVQEVRSRLP
QDAQDPSIVKGTGMTFATMYLAVQNPAMSAEQVTEYIERVIVPRMSTIEGVAESEVMGAA
TYAMRVWIDPVRLAGHGLTAPEVAQAIGNSNFLAAPGRTRGDQVGYALTLQSTLQSPEAF
GEMPVSGSGTEVVRLRDVAEIELAAASSDMVVTFNGRPGTFIGVFPTPGANPLDVSAAVL
AELPSIQAGLPDGMTLELMYDATEQIAASINEVLRTILEATVIVALIILIFMGSVRSVSI
PLVAIPLSLVGTLFILFAMGYSINLLTLLAMVLAIGLVVDDAIIVVENVQRHIEDGQSPR
QAAFTAMRELSVAILAMMTTLFAVFLPLFFSGGLTGALFREFAAAVAGAVAISGLVALTI
SPMMAAHVLRPSGGENRFQRAINRSLTGLEGWYTRRLTGSLRFVPVTMLMVAVLSGLTAF
LFVNTSSELAPEEDSGALFSFINAPSYATVDYTSRYVAEMRERTADLPELAANFSVVGFG
GATNSGIMLWAFDDWAERDRSQAQIQQDLQGRIAPIAGLQAFVFAPPSLPGAGGGLPIGM
VIQSTGSPAEVYEMADRIRQEAQASGRFLVVQNSLSFDTTQLVVTIDRDRAAALNLPAAQ
IGQALGLMVGDGATGQFDRDSQSYDVIVQVPQEYRDSPEALGQIYLRSLSGDLVPLSAVA
SISAEAAPQSIEQFNQLNSATLTALPMIGTSTGDGLAALEEIAQRHLTDSFFVDYEGQSR
LEVSEGNTVLVAFALAIVVIYLALAAQFESLRDPLIILMSVPLTVFGVIVPLNLGLGTLN
IYTQVGLITLIGLITKHGILLVEFANQLRRGAMPDRREAMIEACRLRLRPILMTTAATAL
GVVPLMTADGAGAAARFAMGLVIFSGITVGTAFTLFVVPAFYLLISRREVAPEPEPEPSP
A
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcgcggcccccttcatcaagcgtcccgtcggctccagcgtgctggggatgatg
atcatcctgctgggcatcctgggcctggcggggctggagacgcggcaatatccccgcgtc
gacgaaactgtcatcaccgtgaccaccgtctatcccggcgcatcggcggacctgatccag
ggcttcgtgaccgcccccatcagcagcgccgtcgccaccgccgagggcgtggattacgtc
accagccagtcgcggccatccgcctcgatcgtgtcggtgaacatgaacctgggcgaggat
cccgacaccgccctgaccgaggtcatgtccaaggtccaggaggtccggtcccgcctgccc
caggacgcccaggatcccagcatcgtcaagggcaccggcatgaccttcgcgacgatgtat
ctggccgtccagaacccggccatgtcggccgagcaggtcaccgaatacatcgaacgcgtc
atcgtcccgcgcatgtccaccatcgagggcgtcgccgagagcgaggtcatgggcgcggcc
acctatgcgatgcgcgtctggatcgacccggtgcgcctggccggccacgggctgaccgcc
ccggaggtcgcccaggccatcggcaattcgaacttcctggccgcgcccggccgcacccgg
ggcgatcaggtcggctatgcgctgaccctgcaatccaccctgcaatcgcccgaggccttc
ggcgagatgccggtctcgggttcggggaccgaggttgtgcgcctgcgcgacgtggccgag
atcgagctggccgccgcatccagcgacatggtcgtgaccttcaacggccgccccggcacc
ttcatcggcgtctttcccacccccggggccaacccgctggacgtgtcggcggcggtcctg
gcggaactgccctcgatccaggcgggcctgcccgacggcatgacgctggagctgatgtat
gacgcgaccgaacagatcgccgcatccatcaacgaggtgctgcgcaccatcctggaggcg
acggtcatcgtcgcgctgatcatcctgatcttcatgggctcggtgcggtcggtctcgatc
ccgctggtggcgatcccgctgtcgctggtcggcacgctcttcatcctgttcgcgatgggc
tattcgatcaacctgctgaccctgctggcgatggtgctggcgatcgggctggtggtggat
gacgccatcatcgtggtcgagaacgtccagcgccatatcgaggacggccagtcgccgcgc
caggccgccttcaccgccatgcgcgagctgtcggtcgcgatcctggcgatgatgacgacg
ctgttcgcggtgtttttgccgctgttcttctcgggcgggctgacgggggcgctgtttcgc
gaattcgccgccgcggtggcgggggcggtcgcgatctcggggttggtcgcgctgaccata
tcgccgatgatggccgcccatgtcctgcgcccgagcgggggcgagaaccggttccagcgc
gccatcaaccgcagcctgaccgggctggagggctggtacacccgccgcctgaccggatcg
ctgcgctttgtgccggtgacgatgctgatggtcgcggtgctgtccgggctgacggcgttc
ctcttcgtcaacacctcgtccgagctggcaccggaggaggatagcggcgcgctcttcagc
ttcatcaacgcgccctcctatgcgacggtcgattataccagccgctatgtggccgagatg
cgtgaacgcaccgccgacctgcccgaattggcggcgaatttctcggtcgtgggcttcggg
ggggccacgaacagcgggatcatgctgtgggccttcgacgattgggccgaacgcgaccgc
agccaggcccagatccagcaggacctgcagggccgcatcgcccccatcgcggggctgcag
gccttcgtcttcgcgccgccctcgctgcccggcgcggggggcgggctgcccatcggcatg
gtgatccagtccaccggatctcccgccgaggtctatgagatggccgaccgcatccgccag
gaggcccaggcctcgggccggttcctggtcgtgcagaactcgctgtccttcgacacgacc
cagctggtcgtgacaatcgaccgcgaccgcgcagcggcgctgaacctgcccgccgcccag
atcggccaggccttgggcctgatggtcggcgacggcgccaccggccagttcgaccgcgac
agccagagctatgacgtcatcgtccaggtcccccaggaataccgcgattcccccgaagcc
ctgggccagatctatctgcggtccctgtcgggggacctggtgccgctgtccgccgtcgcc
tcgatcagcgccgaggccgcgccgcaatccatcgaacagttcaaccagctgaactcggcc
acgctgaccgccctgccgatgatcggcacctccaccggcgacggcctggccgcgcttgag
gagatcgcgcagcgccacctgaccgacagcttcttcgtcgattacgagggccagtcccgg
ctggaggtgtccgagggcaacacggtcctggtggccttcgccctggccatcgtggtgatc
tatctggcgctggccgcacagttcgaaagcctgcgcgacccgctgatcatcctgatgtcg
gtgccgctcacggtcttcggtgtgatcgtgccgctgaacttggggctggggacgctgaac
atctatacccaggtggggctgatcacgctgatcgggctgatcaccaagcacggcatcctg
ctggtcgaattcgccaaccagctgcgccgcggggcgatgcccgaccgccgcgaggcgatg
atcgaggcctgccgcctgcgcctgcgcccgatcctgatgaccacggcggccaccgccctg
ggcgtcgtgccgctgatgacggcggatggggcgggcgcggccgcgcgcttcgcgatgggg
ctggtgatcttttcaggcatcaccgtgggcacggccttcacgctcttcgtggtgccggcc
ttctatctgctgatctcgcgacgcgaggtcgcgccggaaccggagccggaacccagcccc
gcctga
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