Pantoea vagans FDAARGOS_160: AL522_10300
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Entry
AL522_10300 CDS
T04302
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
pagg
Pantoea vagans FDAARGOS_160
Pathway
pagg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pagg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AL522_10300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pagg03400
]
AL522_10300
DNA repair and recombination proteins [BR:
pagg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AL522_10300
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AL522_10300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
SBDS_domain_II
UB2H
DUF87
AAA_30
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AMG57990
LinkDB
All DBs
Position
1444286..1446307
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AA seq
673 aa
AA seq
DB search
MTKAFKLNSAFKPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTVANVIADLNRPT
MVLAPNKTLAAQLYGEMKEFFPDNAVEFFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
QMRLSATKALLERRDVIVVASVSAIYGLGDPDLYLKMMLHLTRGMIIDQRSILRRLSELQ
YTRNDQAFQRGTFRVRGEVIDIFPAESDDIALRVELFDEEVERLSLFDPLTGQIDSVVPR
FTIYPKTHYVTPRERILQAMEDIKVELADRRRVLLENNKLLEEQRITQRTQFDLEMMSEL
GYCSGIENYSRYLSARGPGEAPPTLFDYLPADGLLVVDESHVTIPQIGGMYKGDRARKET
LVEYGFRLPSALDNRPMKFEEFEALAPQTIYVSATPGKYELEKSGDEVVDQVVRPTGLLD
PIIEVRPVGTQVDDLLSEIHQRVAINERVLVTVLTKRMAEDLTEYLTEHGEKVRYLHSDI
DTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNINGKAILYGDKITPSMARAIEETERRREKQHLHNEQNGIVPQGLNKKITDILELG
NNVVKTRGKAKPARPGEAQALADFQLLTPQALQKKIHELEGQMQQHAQNLEFEQAANVRD
QLHELRTLFIAAS
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaagcttttaaacttaattccgcctttaaaccttcgggcgaccagccagaggcg
atccgtcgcctggaagaggggctggaggatggactggcccatcagaccttattaggcgtg
accggctccggtaaaacctttaccgtcgccaacgtcattgccgatcttaatcgcccgacg
atggtgctggcacccaacaaaacgctggcggcgcagctctatggcgagatgaaagagttt
ttcccggataacgccgtcgagtttttcgtttcttactacgactactatcagcctgaagcc
tatgtgccgagctccgacacctttatcgaaaaggatgcgtcggtgaatgaacacattgaa
cagatgcgtctgtcggcgaccaaggcgttgctggagcggcgcgatgttatcgtggtggcg
tcggtgtcggcaatttacggtctgggcgatcccgacctctatctgaaaatgatgctgcac
ctgacccgcggcatgattatcgatcagcgcagcatcctgcgccgcctctcagagctgcag
tacacccgcaacgatcaggcgtttcagcgcggcaccttccgcgtacgtggcgaagtgatc
gatatcttcccggcggagtcggacgatatcgcgctgcgcgtcgaactgtttgacgaagag
gtcgagcgtctgtcgctgtttgacccgttgaccgggcagattgattcagtggtgccgcgc
tttaccatctatcccaagacgcactacgtcacgccgcgtgagcgcattctgcaggcgatg
gaagatatcaaagtcgagctggcggatcgccgccgggtgctgctggagaacaataagctg
ctggaagagcagcgtattacccagcgtacccagtttgacctggagatgatgagtgagctg
ggttactgctccggcattgagaactactcgcgctatctctccgcacgcggaccgggcgaa
gcgccaccgacgctgtttgactatctccctgccgatggcctgctggtggtggatgagtcc
cacgtcaccatcccgcagattggtggcatgtacaaaggtgaccgggcgcgcaaagagacg
ctggtggagtatggcttccgcctgccgtcggcgctggacaaccgtccgatgaagtttgaa
gagtttgaggcgctggccccgcagaccatctatgtttcggcaacgccgggtaaatatgag
ctggaaaaatcgggtgatgaagtggtcgatcaggtggtacgtcctaccggcctgctggat
ccgatcatcgaagtgcgtccggtcgggacgcaggtcgacgatctgctgtcggaaatccat
cagcgcgtggcgatcaacgaacgtgtgctggtgacggtgctgaccaagcgcatggcggaa
gatctcactgagtatctgacggagcatggcgagaaggtgcgctatctgcactccgacatc
gacaccgtagagcgtatggagattatccgcgacttacgtctgggtgagtttgatgtgctg
gtgggcatcaacttactgcgtgaggggctggatatgccggaagtgtcgctggtggcgatt
ctggatgcggataaagagggcttcctgcgttccgaacgatcgctgattcagaccattggt
cgtgcggcgcgaaacattaacggcaaggcgattctttatggcgataaaatcacgccctcg
atggcgcgcgctattgaagagacggagcgccgccgcgagaagcagcacctgcacaacgag
cagaacggcattgtaccgcagggcctgaacaagaagatcaccgatattcttgaactcggc
aacaatgtggtgaaaacccgcggcaaagcgaaaccggcacgtcctggcgaagcgcaggcg
ctggccgatttccagctgttaacgccgcaggcgctgcagaagaaaatccacgagctggaa
gggcagatgcagcagcacgcgcagaacctggagttcgaacaggcggccaatgtgcgcgat
cagctgcatgagctgcgaacgctgtttattgcggcctcgtag
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