Paenibacillus albus: EJC50_15280
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Entry
EJC50_15280 CDS
T06567
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
palb
Paenibacillus albus
Pathway
palb02020
Two-component system
palb02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
palb00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EJC50_15280
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
EJC50_15280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
palb03021
]
EJC50_15280
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
palb02035
]
EJC50_15280
Transcription machinery [BR:
palb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EJC50_15280
Bacterial motility proteins [BR:
palb02035
]
Flagellar system
Flagellar assembly proteins
Stator
EJC50_15280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
UPF0122
Sigma70_r3
HTH_38
HTH_16
HTH_23
HTH_5
Motif
Other DBs
NCBI-ProteinID:
AZN40878
UniProt:
A0A3S9A574
LinkDB
All DBs
Position
3349413..3350198
Genome browser
AA seq
261 aa
AA seq
DB search
MIEPKAPHLSNIEIWQKWKEDGDIDAKKRLIEHYLTLVDYVSNRMAIGLPKNVSKDDLSS
NGVMGLIDAIEKFDYRRGLQFETYASWRIRGAIIDGLRSGDWVPRSVREKAKKIEEAYQL
LEQQYMRSVSDAEISEYLAVSEKEFGVMLQEIAVTTVCSLEDPIREEESETRLSLLVDEK
AKNPDYKVHEFFLKESLIRGIDRLTEKERTVISLFYYEELSLSEIAEVMSLSPSRISQLH
SKAILRLRGALEKQKDQLMQH
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgattgagccgaaagcgcctcatttgtctaacatcgagatttggcagaagtggaaagaa
gacggagacatagatgcaaaaaaacgattgatcgagcattatctcacattggttgattac
gtaagcaaccgaatggccatcggcttgccgaagaacgtctccaaggacgatctttcaagc
aatggtgttatgggactcatcgatgcgatcgaaaaattcgattatagacgcggtcttcaa
ttcgaaacatacgcttcatggcgtattcgcggcgcgatcattgatggtctccgttcagga
gactgggtgcctcgttccgtgcgcgagaaagcgaagaagatagaagaagcgtatcagctg
ctagagcagcaatatatgcgttccgtttcggatgcggagatcagcgaatatctcgcagta
tccgagaaagaattcggtgtcatgctgcaggaaatcgctgtgacgacggtctgctctctt
gaggacccgattcgggaagaagaatccgaaactaggctgtcgctgctcgttgatgagaaa
gcgaaaaatccggactataaggtgcatgagtttttcttgaaagaatctctcattcgcgga
attgaccgtttaactgagaaagagagaacggtaatctcactcttctactatgaagaattg
tcgttaagcgaaattgctgaagtgatgtcgttgtcaccttctcgaatctctcaattgcat
tcgaaagctattttgcgattaaggggggcgttggagaaacaaaaagatcaattgatgcag
cattaa
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