Pseudomonas alcaligenes: A0T30_10615
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Entry
A0T30_10615 CDS
T04318
Name
(GenBank) lytic transglycosylase
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
palc
Pseudomonas alcaligenes
Brite
KEGG Orthology (KO) [BR:
palc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
palc01011
]
A0T30_10615
Enzymes [BR:
palc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
A0T30_10615
Peptidoglycan biosynthesis and degradation proteins [BR:
palc01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
A0T30_10615
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
MLTD_N
OapA
Motif
Other DBs
NCBI-ProteinID:
AMR66787
LinkDB
All DBs
Position
complement(2304735..2306312)
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AA seq
525 aa
AA seq
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MFLLPFGTLDTASLARGGKALALLCCIGLAGCQSMGPGDDDGRDTDRAVSLQQEPEWLNE
NAQPEPPKDIWERMRDGFKLQDEIGVNPRIENQRLWFVSNPSFLENASERGSLYIHYVVE
RLEERDMPMELALLPVIESAYNPYAYSRSHAVGIWQFIPSTGRHFNLRQTNWYDGRRDIT
ASTNAALNYLSRLHDMFNGDWLLALAAYNAGEGTVSRAIERNQKLGLPTDYWNLPLPQET
QNYVPKLLALSQIVLSPEAYGVRLNPIANEPYFEQVASKPGLDLARVAAMVDMEEDELES
LNPAFKKGITIDGPQHLLVPIEKAEQFNANLAMMKPQELVRWQEYRVRSGDNLHSIANRY
HLTVNTLKDVNKLRSNHLRVGQVLNIPAQGGREPAQGLHQVAKAPASHPQRYKVKSGDNL
WQIANTHGVSLKDLQRWNGLNARSKLSLGQVLEIRGGSGGTGNAVATSQKSDARQNVTYY
RVKSGDSMYLIAQRFKVDVKHLQRWNPRSDSRALKPGQTLTLYLD
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgtttttattacctttcggaactctcgatacggcgtctctggcgcgcggcggcaaggct
ctggccctgctgtgctgcatcggactggccggctgccagagcatggggccgggcgatgac
gacggccgcgataccgaccgcgccgtaagcctgcagcaggagcccgagtggctcaacgag
aacgcccagccagagccgcccaaggacatctgggaacgcatgcgcgacggcttcaagctg
caggacgagatcggcgtcaacccgcgcatcgagaaccagcgcctgtggttcgtcagcaat
ccgtccttcctggaaaacgccagcgagcgcggcagcctgtacatccactacgtggtcgaa
cgcctggaagagcgcgacatgccgatggagctggccctgttgccggtgatcgagagcgcc
tacaacccctatgcctattcacgcagccatgcagtcggcatctggcagttcatcccctcc
accggtcgccacttcaacctgcgccagaccaactggtacgacggccgccgcgatatcacc
gcctccaccaacgccgcgctgaactacctgagccgcctgcacgacatgttcaacggtgac
tggctgctcgccctggccgcctacaacgccggcgaaggcacggtcagccgcgccatcgag
cgcaaccagaagctcggcctgccgaccgactactggaacctgccgctgccgcaggaaacc
cagaactacgtacccaagctgctggccctgtcgcagatcgtgctgtcgcccgaggcctat
ggtgtacgcctcaatccgatcgccaacgagccctacttcgagcaggtggcaagcaagccg
ggcctcgatctggcgcgcgtggccgccatggtcgacatggaagaggacgagctggagagc
ctcaacccggccttcaagaaaggcatcaccatcgatggcccgcagcacctgctggtgccc
atcgagaaggccgagcagttcaacgccaacctggcgatgatgaaaccgcaggaactggtg
cgctggcaggagtatcgggtgcgctcgggtgacaacctgcacagcatcgccaaccgctac
cacctgacggtcaataccctgaaggacgtcaacaagctgcgcagcaaccacctgcgcgtc
ggccaggtgctgaacatcccggcacagggtggccgcgagccggcgcagggcctgcatcag
gtggccaaggcgccggccagccatccgcagcgttacaaggtcaagagcggtgacaacctg
tggcagatcgccaacactcacggcgtatcgctcaaggacctgcagcgctggaacggcctg
aatgcccgcagcaagctgagcctgggccaggtgctggaaattcgtggcggcagtggcggc
accggcaacgcggtggcgaccagccaaaagagcgacgcgcggcaaaacgtcacctactac
cgggtcaagagcggcgactccatgtacctgatcgcccagcgcttcaaggtcgacgtcaag
cacctgcagcgctggaatccgcgcagcgacagccgcgcgctcaagccggggcagacactg
acgctgtatctcgactga
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