Pteropus alecto (black flying fox): 102880532
Help
Entry
102880532 CDS
T02993
Symbol
THOC1
Name
(RefSeq) THO complex subunit 1 isoform X1
KO
K12878
THO complex subunit 1
Organism
pale
Pteropus alecto (black flying fox)
Pathway
pale03013
Nucleocytoplasmic transport
pale03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pale00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102880532 (THOC1)
09122 Translation
03013 Nucleocytoplasmic transport
102880532 (THOC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pale03019
]
102880532 (THOC1)
03041 Spliceosome [BR:
pale03041
]
102880532 (THOC1)
Messenger RNA biogenesis [BR:
pale03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
102880532 (THOC1)
Spliceosome [BR:
pale03041
]
Complex C
Other components
EJC/TREX
102880532 (THOC1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
102880532 (THOC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Death
HsdM_N
Motif
Other DBs
NCBI-GeneID:
102880532
NCBI-ProteinID:
XP_006920104
LinkDB
All DBs
Position
Unknown
AA seq
657 aa
AA seq
DB search
MSPTPPLFSLPEARTRFTKSTREALNSKNIKPLLNTFNQLPGSENEKKCTLDQAFRGVLE
EEIINHSSCENVLAIISLAIGGVTEGICTASTPFVLLGDVLDCLPLDQCDTIFTFVEKNV
ATWKSNTFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQ
FNLENVTVFNTNEQESTLGQKHTEDREEGMDVEEGEMGDDEAPTTCSIPIDYNLYRKFWS
LQDYFRNPVQCYEKISWKTFLKYSEEVLAVFKSYKLDDTQASRKKMEELKTGGEHVYFAK
FLTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSNYVLTDEQSLWIEDTTKSV
YQLLSENPPDGERFSKMVEHILNTEENWNSWKNEGCPSFVKERASDTKPTRVVRKRTAPE
DFLGKGPNKKILMGNEELTRLWNLCPDNMEACKSETREYMPTLEEFFEEAIEQADPENMV
ENEYKAVNNSNYGWRALRLLARRSPHFFQPTNQQFKSLPEYLENMVIKLAKELPPPSEEI
KTGEDEDEEDNDALLKENESPDVRRDKPVTGEQIEVFANKLGEQWKILAPYLEMKDSEIR
QIECDSEDMKMRAKQLLVAWQDQEGVHATPENLINALNKSGLSDLAESLTNDNETNS
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgtctccgacgccgccgctcttcagtttacccgaagcgcggacgcggtttaccaagtct
accagagaggccctgaacagcaaaaatatcaagccattgttgaataccttcaaccagtta
cctggcagtgaaaatgaaaaaaaatgtacccttgaccaagctttcagaggtgttctagaa
gaagaaattataaatcattcatcatgtgaaaacgttttagctattatttctcttgctatt
gggggagtaactgaaggtatttgtactgcatctacaccttttgtattgttgggagatgtt
ttggattgtcttcctttggatcagtgtgacacaatattcacttttgtggaaaaaaatgtt
gctacttggaaatcaaatacattctattctgctgggaaaaattatttactacgtatgtgc
aatgatctccttagaagattatccaaatcccagaatacagtcttctgtggacgaattcaa
ctctttttggccaggctttttcctttatctgagaaatcaggtcttaacttgcagagtcag
tttaatctggaaaatgtcactgttttcaataccaatgagcaggaaagcaccttgggtcag
aagcacactgaagacagagaagaagggatggatgtagaagaaggtgagatgggagatgat
gaagctccaacaacttgctccattccaatagattacaacctgtatcgaaaattctggtca
cttcaggattatttcaggaaccctgtgcaatgctatgagaagatttcatggaaaactttt
ctcaagtattctgaagaagttctagctgtttttaagagttataaattagatgatactcag
gcctcaaggaaaaagatggaggaattgaaaacaggaggggagcatgtatattttgcaaaa
tttctaacaagtgaaaagttgatggatttacaattgagcgacagtaactttcgccgacac
atcttattgcagtacctcattttattccaatatctcaagggacaggtcaaattcaaaagt
tcaaactatgttttaactgatgagcaatcactctggattgaagatactacaaaatcagtt
tatcaactactatctgaaaacccacccgatggagaaagattttcaaagatggtagagcat
atattaaacactgaagaaaactggaactcatggaaaaatgaaggctgcccaagttttgtg
aaagaaagggcatcagataccaagccaacaagagtagtacggaagagaacagcaccagag
gacttcctaggaaaaggacccaacaaaaagattctgatgggaaatgaggagttaacaagg
ctttggaatctctgccctgataatatggaagcctgtaaatcagaaacaagagaatacatg
ccaactttggaggaattcttcgaagaagccattgaacaagcagaccctgaaaacatggtt
gaaaatgaatataaagctgtgaataattcaaattatggttggagagccctgagactatta
gcacggagaagccctcacttcttccagccaaccaaccagcaatttaaaagtttgccagaa
tatcttgaaaacatggtaataaagctagccaaggaattaccacctccttctgaagaaata
aaaacaggtgaggatgaagatgaggaagataatgatgctttactgaaggaaaatgaaagt
cctgatgttcggcgagacaaacctgtaacaggggaacaaatagaggtatttgccaacaaa
ctaggcgaacaatggaagattctggctccctacttggaaatgaaagactcagaaattaga
cagatcgagtgtgacagcgaagacatgaagatgagagctaagcagctactagtcgcctgg
caagatcaagagggagtacatgcaacacctgagaacctgattaatgcactcaataagtct
ggattaagtgaccttgcagaaagtctaactaatgacaatgagacaaatagttag
DBGET
integrated database retrieval system
