Pteropus alecto (black flying fox): 102889853
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Entry
102889853 CDS
T02993
Symbol
SAMHD1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1 isoform X1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
pale
Pteropus alecto (black flying fox)
Pathway
pale03250
Viral life cycle - HIV-1
pale04623
Cytosolic DNA-sensing pathway
pale05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pale00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
102889853 (SAMHD1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
102889853 (SAMHD1)
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
102889853 (SAMHD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pale03400
]
102889853 (SAMHD1)
DNA repair and recombination proteins [BR:
pale03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
102889853 (SAMHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAM_2
HD
SAM_1
HD_assoc_2
PDEase_I
DUF1368
Motif
Other DBs
NCBI-GeneID:
102889853
NCBI-ProteinID:
XP_006921854
LinkDB
All DBs
Position
Unknown
AA seq
629 aa
AA seq
DB search
MQCSDSEQTPKKCRLDASLLRTPPNTAAAAAAAAESPDSKLHRNHKIWDPEQVCRFLIYC
DFKDPRVLDRVREEKITGSLLPFLNETHLENLGISSSSERKKLLNSIKQLSQTYVDKRKV
INDPIHGHIEFHPLLIRIIDTPQFQRLRYIKQLGSAYYVFPGASHNRFEHSLGVAYLAGC
LVRALSERQPELELSERDILCVQIAGLCHDLGHGPFSHMFDGRFIPLARQDVQWTHEQGS
VDMFEHLINSNGLRTVMEEHGLILEEDIYFIKEQITGPLESPVKENSWPYKGRPKEKSFL
YEIVANKRNGIDVDKWDYFARDCHHLGIQNNFDYKRCIMFARVCKVGEQMHICSRDKEAG
NLYDMFHTRSSLHRTAYQHKVGNIIDTMITDAFLKADPYIEIIGAEGKKYHISTAIDDME
AFTKLTDNIFLEILYSTDPKLDEAREILKKIEHRNLYKYVGETQPVGETKINKEDYEWIP
KDIAEAKPGVLLETELKAEDFIVDVINVNYGLEDKNPIDHVYFYCKSDPEQAIQINKNQV
SKLLPEKFSEQLIRVYCKKTDEKSLFAARQHFVYWCSLNNFTKPQDGDVIAPLITPLKLE
WNYPNLAQSPAVIQEGSKARHRLFQHDSM
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgcagtgctccgactccgagcagacccccaaaaagtgccgactcgatgccagccttcta
agaaccccgccgaacactgctgccgctgccgctgcggctgcagagtccccggactccaag
ctccaccgcaaccacaagatctgggacccggagcaggtgtgccgcttcctaatctactgt
gacttcaaagatcccagagtgctggaccgcgtccgagaagagaaaatcacaggttcatta
ctgccctttcttaatgagactcatcttgaaaatcttggtataagttcctcgtcggagaga
aagaagttgctcaattctatcaaacaactgagtcaaacttatgttgataaaaggaaggtc
attaatgatcctattcatggccacattgaattccaccctctcctcatccgaatcatcgac
acacctcaatttcagaggcttcgctatattaaacagttgggaagtgcttactatgttttt
ccgggagcttcacacaatcgatttgagcatagtctaggcgtagcatatctagcaggatgt
ctggttcgtgcactgagtgagagacaaccagagctggagttgagtgaacgagatatactc
tgtgttcagattgctgggctttgtcatgatctcggtcatgggccattttcccatatgttt
gatggaagatttattccacttgctcgccaagatgtgcaatggacgcatgaacaaggctca
gttgatatgtttgagcacctaattaattctaatggactcagaactgtcatggaagagcat
ggtctcatccttgaagaagatatttactttatcaaggagcaaattacaggaccacttgaa
tcgccagtcaaagagaattcgtggccatacaaagggcgtcctaaagagaaaagtttcctt
tatgaaatagtggccaataaaagaaatggcattgatgtggacaaatgggattattttgcc
agggactgccatcatcttggtatccaaaataattttgattacaaacgctgtattatgttt
gcccgtgtctgtaaagtaggagagcagatgcatatctgtagtcgagacaaggaggctggg
aatctgtacgacatgttccatacacgcagctctttgcatcgtacagcttatcaacacaaa
gttggcaacatcattgacacaatgattacagatgcttttctcaaagcagacccctacata
gagattataggtgctgaaggaaaaaagtatcacatttctacagcaattgatgacatggaa
gccttcactaagctaacagataacatttttctggagattttatactctaccgatcccaaa
ttggatgaagcacgggagattttaaaaaaaattgaacaccgtaatctgtacaagtacgtg
ggtgagactcagccagttggagaaacaaagattaataaggaagactatgaatggattcca
aaagacattgctgaagccaaacctggagtactcctagaaactgagctgaaggctgaagat
ttcatagtggatgttatcaacgtgaattatggattggaagacaagaatcctattgatcac
gtgtacttctattgtaagagtgaccctgagcaagcaatccagattaataaaaatcaggtt
tccaagcttttgccagagaaattttcagagcagctgattcgcgtgtactgtaagaagacg
gatgaaaagagtttgtttgctgcacgccagcatttcgtttattggtgctcactcaacaac
ttcaccaagcctcaggatggcgatgttatagccccacttataacacctctaaaattggaa
tggaattacccgaatttagcccagagtccagctgtcatccaagaaggatccaaagcccga
catcggctttttcagcatgactcaatgtga
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