Pantoea alfalfae: K6R05_06725
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Entry
K6R05_06725 CDS
T09440
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
palf
Pantoea alfalfae
Pathway
palf00521
Streptomycin biosynthesis
palf00523
Polyketide sugar unit biosynthesis
palf00541
O-Antigen nucleotide sugar biosynthesis
palf01100
Metabolic pathways
palf01110
Biosynthesis of secondary metabolites
palf01250
Biosynthesis of nucleotide sugars
Module
palf_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
palf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
K6R05_06725 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
K6R05_06725 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
K6R05_06725 (rfbC)
Enzymes [BR:
palf01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
K6R05_06725 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QZX96900
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Position
1448241..1448789
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AA seq
182 aa
AA seq
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MKIIDTKIPDVKIIEPKVFGDERGFFLESFNQSIFDNAVGRHVDFVQDNHSMSKKGVLRG
LHYQLAPHAQGKLVRCVEGEVFDVAVDIRRSSETFGQWVGVHLSAENNRQLWIPEGFAHG
FITLSDRVQFIYKTTNYYAPQSERSILWNDPQINIEWPEVEEMTLSGKDKDGVLLNNAET
FN
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgaagattattgatactaaaattcctgatgtaaaaatcattgagccaaaagtgtttggt
gatgagcgtggttttttcctggaaagcttcaatcagtcaatttttgataatgccgttggt
cgacatgtcgactttgttcaggacaatcactcaatgtccaaaaaaggcgtgttgagaggc
cttcattaccaacttgcccctcatgcccagggtaaacttgtgcgctgcgttgaaggggaa
gtatttgatgtagctgtagatatcagacgttcatcagaaacatttggacaatgggtcggc
gtacatttaagcgctgaaaacaaccgtcagctctggattccagaaggctttgctcatggt
ttcatcacactttcggatcgtgtacagtttatttataaaaccacaaattattatgcgcca
cagtcagaaagaagcattttgtggaatgatccgcagataaatattgaatggcctgaagtt
gaagaaatgactttgtctggcaaagataaagatggcgtattgctcaataacgcagaaact
ttcaattga
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