Pantoea alfalfae: K6R05_17725
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Entry
K6R05_17725 CDS
T09440
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
palf
Pantoea alfalfae
Pathway
palf00071
Fatty acid degradation
palf00280
Valine, leucine and isoleucine degradation
palf00310
Lysine degradation
palf00362
Benzoate degradation
palf00380
Tryptophan metabolism
palf00410
beta-Alanine metabolism
palf00640
Propanoate metabolism
palf00650
Butanoate metabolism
palf00907
Pinene, camphor and geraniol degradation
palf00930
Caprolactam degradation
palf01100
Metabolic pathways
palf01110
Biosynthesis of secondary metabolites
palf01120
Microbial metabolism in diverse environments
palf01200
Carbon metabolism
palf01212
Fatty acid metabolism
Module
palf_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
palf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
K6R05_17725 (fadB)
00650 Butanoate metabolism
K6R05_17725 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
K6R05_17725 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
K6R05_17725 (fadB)
00310 Lysine degradation
K6R05_17725 (fadB)
00380 Tryptophan metabolism
K6R05_17725 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
K6R05_17725 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
K6R05_17725 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
K6R05_17725 (fadB)
00930 Caprolactam degradation
K6R05_17725 (fadB)
Enzymes [BR:
palf01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
K6R05_17725 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
K6R05_17725 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
K6R05_17725 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
K6R05_17725 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
DUF3048
Motif
Other DBs
NCBI-ProteinID:
QZX95538
LinkDB
All DBs
Position
3798867..3801050
Genome browser
AA seq
727 aa
AA seq
DB search
MLYQGANLTLHWLDDGIAELVFDATGSVNKLDTQTVASLGEAIAVLEQQPELRGLLLSSA
KPAFIVGADITEFLSLFDAPTEKLSQWLSYANSIFNRLEDLPVPTLAAIDGYALGGGCEC
VLATDLRIATADARIGLPETKLGIMPGFGGSVRLPRLLGADSALEIIAAGKDVDGNAALK
LGLVDAVVSREKLREAGIAMLKAAATDGSWRARRAPKLAPLKLSPIEAAMSFTIAKAMVL
QTAGKHYPAPLMAVKTIEAAASLGRDDALKLETAAFVPLAQSDEARALVGIFLNDQYVKS
LAKKRGSESGAPAQAAVLGAGIMGGGISYQSAWKGVPVRMKDINPQALTLGMNEASKLLN
KLLERGKIDGSKLASVIATIQPTLDYAGFDQADVVVEAVVENPLTKAKVLAETEQHLRQD
AILASNTSTIPISQLAQALQRPENFCGMHFFNPVPRMPLVEVVRGEKTSEATLSKVVAWA
SKMGKTPIVVNDCPGFFVNRVLFPYFSAFSLLLRDGADFRQIDKVMEKQFGWPMGPSWLL
DVVGIDTAHHAQSVMADGFPDRMKHDYRDAIDLLFDAGRFGQKNGKGFWRWEEDKKGKLK
KVPDAEVDTLLQQVCQPARAFSDEEILNRMMLPMLNEVVRCLEEKIIASPAEADMALVYG
LGFPPFRGGAFRYLDTLGNSNVVDQARRYSALGGLYALPALLVQKAHQHESWYPAAKPID
EAALKSA
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgctctaccaaggcgctaaccttactcttcactggctggacgatggcatcgccgagctg
gtttttgacgctacaggctcggtcaataagctcgatacgcaaacggtcgccagtctgggc
gaggcgattgcggtactggaacagcagccagaactgcgcggcctgctgctgagctccgct
aaacctgcttttattgtgggcgcggatatcaccgagtttctttctctgtttgatgcaccc
accgaaaagctgagtcagtggttgagctacgccaacagcatcttcaaccgtttggaagat
ttgccggtgccgactctggccgccattgacggctatgcgctgggcggtggatgtgaatgc
gtactggcaaccgatctgcgtattgccactgcggacgcccgtattggcctgccggaaaca
aaacttggcatcatgcccggctttgggggcagcgtgcgactaccgcgcctgctgggcgcc
gacagtgcgctggaaattattgcggcgggtaaagatgttgatggcaacgccgccctgaaa
ctcggcctggtcgatgcggtggtgtcgcgcgagaaactgcgcgaggcggggatcgcgatg
ctcaaagccgccgctactgatggcagctggcgggcgcgccgggcaccgaaactggcaccg
ctgaaactcagtccgattgaagcggcgatgagcttcacgattgcgaaagcgatggtgctg
cagaccgcaggtaaacactatcccgctccgctaatggccgtaaaaacaattgaagcggcg
gccagcctgggtcgtgatgatgcgctgaaacttgaaacggcggcgtttgtgcccctggcg
cagtctgatgaagcccgcgcactggtcggcatctttctcaacgaccagtacgttaaaagc
ctggcgaaaaaacgcggcagcgaaagcggcgcaccggctcaggcagcggtactgggcgcg
ggcatcatgggtggcggcatcagctatcagtcggcctggaaaggtgtgccggtaagaatg
aaagacattaatccgcaggcgttaacgctggggatgaatgaagccagcaagctgctcaat
aagctactggagcgcggcaaaatcgacggcagtaaactcgccagtgtgatcgccactatt
cagcccaccctggattacgccggttttgaccaggccgatgtggtggtggaagccgtggtc
gagaacccgctgaccaaggccaaagtgctggcggaaaccgaacagcatctgcgtcaggat
gcgattctcgcctccaatacctcaaccattcctatcagccagctggcgcaggcgctgcag
cgcccggaaaacttctgtggcatgcacttcttcaatccggtgccgcgtatgccgctggtt
gaagtggttcgtggcgagaaaaccagtgaagcgacactgagtaaagtggtggcatgggcc
agcaaaatgggcaaaacgcctatcgtggtgaatgactgccccggcttctttgtgaaccgg
gtactgttcccctacttctctgctttcagcctgctgctgcgcgacggcgctgatttccgt
cagattgataaagtgatggaaaaacagttcggctggccgatggggccgtcatggctgctg
gatgtggtgggcatcgataccgcgcaccacgcacaaagcgtgatggccgatggtttcccg
gatcgtatgaagcatgactatcgcgatgcgatagacctgctgtttgatgccggtcgtttt
ggtcagaaaaatggcaaaggcttctggcgctgggaagaggataaaaagggcaagctgaag
aaagtgccggatgctgaagtggatacgctgctacaacaggtctgtcagcccgcgcgggcc
ttcagtgatgaagagatcctgaaccgtatgatgctgccgatgctgaatgaagtcgtgcgc
tgcctggaagagaagattatcgcctcgccagcagaagcggatatggcgctggtctatggt
ctcggcttcccgccgttccgtggcggcgctttccgctaccttgataccctgggcaacagc
aatgtggtcgatcaggcccggcgctacagcgcacttggtggcctgtatgccctgcctgcg
ctgttggtgcagaaagcccatcagcatgaaagctggtatcccgccgccaaaccgattgat
gaagccgcgctgaaaagcgcctga
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