Parasphingopyxis algicola: HFP57_09920
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Entry
HFP57_09920 CDS
T06669
Name
(GenBank) cisplatin damage response ATP-dependent DNA ligase
Organism
palg
Parasphingopyxis algicola
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Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_C
DNA_ligase_A_N
RNA_ligase
Motif
Other DBs
NCBI-ProteinID:
QLC25306
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Position
2002293..2003876
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AA seq
527 aa
AA seq
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MRRFAQLLDRLVYTRSRNAKLRLIADYLRSTSDPDRGWALAALTGSVDIPGVKRAAVKAI
VDERVDPVLFRMSRDYVGDTAETVSLIWPARETADTDIADLSISAVIERLMRLGRADAPA
ALADMLDRLDPPGRYALLKLAMGGLRVGVSARLAKTAFAQAFDLDVEAVEEVWHGLKPPY
PELFAWGDGGEQPSIDDIPVFRPFMLAHPLGETTVSMDEFAAEWKWDGIRIQLVHVGGET
RLFSRTGDDISHSFPDIAEAFRETGALDGELLVRGEAQGGTEGGAASFNALQQRLGRKNV
SAKMRAEFPAFVRLYDILFDDGEDLRALPWTARRERLEAFVPRLPDDRFDLSSIIEAETF
DALAALRDGARDAAIEGVMLKRRDSEYRAGRKTGLWYKWKRDPLTADCVIMYAQRGSGKR
SSFYSDYTFGCWTADGELHPVGKAYSGFSDEELKWLDRFVRTNTLNRFGPVREVEKTLVV
EVAFDSVHESKRHKSGLAMRFPRISRLRRDKPAHEADTIATLQAMID
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgcgccgttttgcccagcttctcgaccggcttgtctatacccggtcccgcaatgccaaa
ctccggctgatcgccgactatctccggtcgacgtccgatcccgatcgcggctgggcgctg
gccgcgctgaccggctccgtcgatataccgggagtcaaacgggcggcggtgaaagcgatc
gtcgacgagcgcgtcgatcccgtgctgttccggatgagccgggactatgtcggcgatacg
gcggaaaccgtgtcgctgatctggcccgcccgcgaaacggccgacacggatattgcggac
ctgagcatctccgccgtgatcgagcggctgatgcggctcggccgcgccgatgccccggct
gcgctggcggacatgctcgaccggctcgatccgccgggccgctatgcgctgctgaaactg
gcgatgggcggattgcgcgtgggcgtctccgcgcggctcgccaagaccgccttcgcccag
gccttcgatctcgacgtcgaagcagtggaagaggtctggcacgggctgaaaccgccctat
cccgaactgttcgcctggggcgatggcggcgagcagccttcgatcgacgatatccccgtg
ttccgcccgttcatgctcgcccatccgctaggcgaaacgaccgtgtcgatggacgagttc
gccgccgaatggaaatgggacgggatccgcatccagctcgtccatgtcggcggcgagacg
cggctcttcagccgcaccggcgacgatatctcacacagcttccccgatatcgccgaggcg
tttcgcgaaaccggcgcgctggacggcgagctgctggtgcgcggcgaggcgcagggcgga
accgaaggcggcgccgcgagcttcaatgccctgcagcagcggctgggccgcaagaatgtc
tcggccaagatgcgggccgagttccccgcctttgtccggctctacgatatcctgttcgat
gacggcgaggatctgcgcgccctgccatggaccgcgcggcgggaacggctcgaagcattc
gttccgcgcttgccggatgaccggttcgatctctcttcgatcatcgaggcggagacgttc
gacgcgctggccgcattgcgcgacggcgcgcgcgatgcggcgatcgagggcgtcatgctg
aagcgtcgcgacagcgaatatcgggcgggccgcaagaccgggctctggtacaaatggaag
cgcgacccgctgaccgccgattgcgtgatcatgtatgcgcagcgcggctcgggcaagcga
tcgagcttctattccgactataccttcggctgctggacggcggacggcgagctgcatccg
gtcggcaaggcttattcgggcttttccgacgaggagctcaaatggctcgaccggttcgtg
cgcaccaatacgctcaaccgtttcgggccggtgcgcgaggtggaaaagacgctcgtcgtc
gaagtggccttcgattccgtgcatgaatcgaagcgccacaaatcggggctcgcgatgcgc
ttcccgcggatatcccgcctgcgccgggacaagcctgcacatgaagccgacacgattgcg
acattgcaggcgatgatcgactag
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