KEGG   Pseudomonas alkylphenolica: PSAKL28_10260
Entry
PSAKL28_10260     CDS       T03238                                 
Name
(GenBank) type VI secretion system Vgr family protein
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
palk  Pseudomonas alkylphenolica
Pathway
palk03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:palk00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    PSAKL28_10260
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:palk02044]
    PSAKL28_10260
Secretion system [BR:palk02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   PSAKL28_10260
SSDB
Motif
Pfam: Phage_GPD Phage_base_V DUF6484 DUF6296
Other DBs
NCBI-ProteinID: AIL60256
UniProt: A0A077FA42
LinkDB
Position
1124828..1126852
AA seq 674 aa
MFASANAAHFALLIPSVRNDFKVLAFDGTETISTLYAIQVELVSEYPDFDLESLLSQPAF
LQFGLNGEGIHGRIEDVRVGEPGKRLTRYQLTLVPALHYLQFSHNQRIFQQLTVPQIVAQ
VLQGHGIQADAFSFHVSPRPVREYCTQYGEDDLSFIMRLCSEEGIAWHHQHSPDGHRLVF
TDDQVFFPKLGATPYQQGAGLVADHPVISQFSQRFSTRTTTVTRRDYDLKRPSRLVENHS
TAEFTPALEDYRYPTAIETEERGKQLARLALERHRSDYQLAEGKSDQPSLRSGHFFDLRE
HPRKASNDLWLLLSVSHKGKQPQVLEESVTNDDQPEDGFSQGYRNTFSAIPWDVFYRPPL
VTRKSVLVSQTARVTGPEGEEIFCDEHGRVKVEFHWDRAELNSDKSSCWLRVSSSWAGEG
FGAVTIPRIGMEVLVTFLEGDPDQPLITGCVPNTRTAVPYPLPANKTKTVLRSRSSPASG
GYNELSIEDRSGQELIYLRAQRDLAQKIENDSRLEVGNERRETIKGNSIAVLEAEDQRTV
TADRKIELKANDYLQVASSSHTRVGQTLVAEAGQQTHLKAGVQVVLDAGASITLKGGGQH
LVIGPGGIFSSVPIVLGGTPVLGVPAQQALSAVSILSEAPVALSLVAQKTALVQAAEQAA
PLCAVCQKLSEVKA
NT seq 2025 nt   +upstreamnt  +downstreamnt
atgttcgcgtcggccaatgctgcgcacttcgcattgttgatcccttctgtccgcaacgat
ttcaaggtactggcctttgacggtactgaaactatcagtaccttgtacgcaatccaggtc
gagctggtcagcgagtaccctgacttcgatctggaaagcctgctcagtcagccggcgttc
cttcagtttggcctgaatggcgaaggtatccacggccgtatcgaagatgtcagggtcggc
gagccgggcaagcgcctgacgcggtatcagctgactctggtcccggccctgcattacttg
cagttcagccacaaccagcggattttccagcagttgacggtgccgcagatcgtcgctcag
gtgctccagggccatggcattcaggccgatgcctttagcttccatgtcagcccccgcccg
gtgcgcgaatactgcacgcagtatggggaggatgacctcagcttcatcatgaggctgtgc
agtgaagaaggcattgcctggcatcaccagcacagcccggacggtcatcggctggtgttc
accgacgatcaggtcttttttcccaaactgggggcaaccccgtatcagcaaggcgccggt
ctggtggccgatcacccggtcatcagccagttctcccagcgcttcagcacccggaccact
accgtcacccggcgagactacgacctcaaacgcccaagccggttagtggagaaccactcc
accgccgagttcacgccggcgcttgaagattaccgctaccccacggcgatcgaaaccgaa
gagcgtggcaagcagcttgcccgtctggccctggaacggcatcgcagcgactaccagttg
gccgaaggcaaaagcgatcagccgagcctgcgcagcggtcatttcttcgacctgcgcgaa
cacccgcgcaaagcgagcaacgacttgtggctattgctcagcgtaagccacaaaggcaaa
cagccgcaggtgcttgaggaatcagttaccaacgacgaccagcccgaagacggcttcagc
caaggctaccgcaacactttcagcgccattccctgggacgtgttctatcggccaccgctg
gtcacccgaaaatcggtactggtcagccagaccgcccgtgtcactgggcctgaaggcgaa
gaaatcttttgcgatgagcatggccgggtaaaagtcgagttccattgggaccgtgccgag
ctgaacagcgacaagagcagttgctggttacgggtttcatccagttgggccggcgagggc
ttcggcgcggtgaccatcccgcgcatcggcatggaagtgctggtgacctttctggaaggt
gaccccgaccagccgttgattactggctgtgtgcccaatacccgcacggcggtgccctat
cccttgcccgcgaacaaaaccaaaaccgtgttgcgcagccgcagctcacccgccagcggc
ggttacaacgaactgtcgattgaagaccgcagtggccaggagttgatctacctgcgcgcc
cagcgcgacctggcgcaaaagatcgagaacgacagccgcctggaagtcggcaatgaacgc
cgggaaaccatcaagggcaacagcattgcggtgctggaagccgaagaccagcgcaccgtc
accgccgaccgcaagatcgaactcaaagccaacgactatttgcaggtcgccagcagcagc
catacccgcgtcgggcaaacgctggtggctgaagccggccagcaaacccacctcaaggca
ggggtccaggttgtcctcgatgccggggccagcatcaccttgaaaggcggcggtcagcac
cttgtcatagggcccggcggtattttcagcagcgtgcccatcgttctgggggggacgccg
gttttgggcgttcccgcgcagcaggccctttcggccgtatcgatactctccgaggcgccg
gtggcgctgtcactggttgcccaaaaaacggcattggtgcaagccgctgagcaagccgcg
cccctctgtgccgtgtgtcagaagctatcggaggtgaaggcatga

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